krakenuniq
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error building kraken report
Hi,
I tried KrakenUniq with the prebuilt index 'EuPathDB48' from https://benlangmead.github.io/aws-indexes/k2.
Krakenuniq itself runs fine. However, both krakenuniq-translate & krakenuniq-report give similar errors for every line.
krakenuniq-report: Use of uninitialized value $taxid in hash element at /data/antwerpen/grp/abiodatamining/tools/Miniconda/envs/krakenuniq/bin/krakenuniq-report line 121, <> line 465160. Use of uninitialized value $taxid in hash element at /data/antwerpen/grp/abiodatamining/tools/Miniconda/envs/krakenuniq/bin/krakenuniq-report line 121, <> line 465161
krakenuniq-translate:
Use of uninitialized value $taxid in exists at /data/antwerpen/grp/abiodatamining/tools/Miniconda/envs/krakenuniq/bin/krakenuniq-translate line 91, <> line 189978. Use of uninitialized value $taxid in hash element at /data/antwerpen/grp/abiodatamining/tools/Miniconda/envs/krakenuniq/bin/krakenuniq-translate line 112, <> line 189978. Use of uninitialized value $seqid in concatenation (.) or string at /data/antwerpen/grp/abiodatamining/tools/Miniconda/envs/krakenuniq/bin/krakenuniq-translate line 86, <> line 189978.
Use of uninitialized value $taxid in exists at /data/antwerpen/grp/abiodatamining/tools/Miniconda/envs/krakenuniq/bin/krakenuniq-translate line 91, <> line 190030. Use of uninitialized value $taxid in hash element at /data/antwerpen/grp/abiodatamining/tools/Miniconda/envs/krakenuniq/bin/krakenuniq-translate line 112, <> line 190030. Use of uninitialized value $seqid in concatenation (.) or string at /data/antwerpen/grp/abiodatamining/tools/Miniconda/envs/krakenuniq/bin/krakenuniq-translate line 86, <> line 190030.
Do you know what could be the issue?