EvolviewDocumentation

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Note: the following documentation is for Evolview version 2. To access the new documentation for our latest version of Evolview(version 3) kindly access : https://www.evolgenius.info/evolview/helpsite/qst1.html

Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees

EvolView is an online tool for displaying, managing and customizing phylogenetic trees.

With EvolView, you can:

• visualize phylogenetic trees of various formats,

• add datasets and do customizations to phylogenetic trees,

• export trees to various text (newick, nhx, phyloXML, etc) and graphic formats, and

• organize trees, projects and datasets in an intuitive and efficient way.

• Cite our latest publication if you find this tool useful:

1. Subramanian et al. (2019). "Evolview v3: a webserver for visualization, annotation, and management of phylogenetic trees." Nucleic Acids Res 47(W1): W270-W275. (https://doi.org/10.1093/nar/gkz357)

2. He et al, Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees, Nucleic Acids Res, (2016). (http://nar.oxfordjournals.org/content/44/W1/W236)

3. Zhang et al. EvolView, an online tool for visualizing, annotating and managing phylogenetic trees. Nucleic Acids Res (2012) pp. 4. (http://nar.oxfordjournals.org/content/40/W1/W569). See also the citation page.

Table of Contents

The WebServer

* Evolview Web server

Supported Browsers

* Supported browsers

What's New

* See latest news and updates on _Evolview_

A quick start

* A quick walkthrough of _Evolview_

A not so quick start

• A detailed introduction to Evolview
• Please choose a topic below to continue
  • Create an account
  • Use anonymously
  • Login with SNS accounts
  • The interface

Supported HTML color names (link to external webpage)

• Supported HTML color names in Evolview
• Note: hex colors are of course supported!!

Performance of Evolview

* performance of Evolview

Some Artistic visualisation styles

* Stylish tree visualisation styles that can be used in combination with others

Datasets

• Detailed introduction to supported annotation datasets
• Please choose a topic below to continue:
  • Dataset overview
  • Stroke color and width
  • Pie charts
  • Bars
  • Branch color
  • Leaf color
  • Leaf background color
  • Leaf label decorations
  • Color strip and color shapes
  • Protein domains
  • Group label
  • Dot plots
  • Heatmap
  • Bootstrap value style
  • Column plots
  • Collapse at internal nodes
  • Time line

Share your tree

* Share your trees for others to view

Supported tree formats

* Supported trees and examples

FAQs

* Frequently asked questions

Acknowledgements

* Acknowledgements

Deploy Evolview to a local server

* Deploy Evolview to a local server