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Problem with custom path to taxdump.tar.gz

Open aziele opened this issue 2 years ago • 1 comments

Hi,

I'm trying to specify the custom path for the taxdump.tar.gz file. The file successfully downloads to the path I specify, however I get an error when ete3 tries to open the file (The file does not exist). I think the issue is with the update_db(dbfile, targz_file=None) function.

ncbi = NCBITaxa()
ncbi.update_taxonomy_database('/home/user/Desktop/taxdump.tar.gz')

aziele avatar Mar 16 '22 07:03 aziele

I'm afraid that I am not able to reproduce the error you had, would you like to provide more information including the ete version you were using?

dengzq1234 avatar Apr 21 '22 09:04 dengzq1234