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quality report vs length report
Dear community
I got the full report for read length and quality using the following command lines
nanoq -i my_file.fastq -s -Q report_quality.txt nanoq -i my_file.fastq -s -L report_length.txt
I can see that in both reports, the number of lines corresponds to the number of reads in my file and that means average quality and length for each read, written into one line in the report files.
the report is sorted in ascending order. can I assume that for instance, the Q value in line 1 of report_quality.txt corresponds to (from the same read) the L value from line 1 in the report_length.txt? in other words, can I assume both values belong to the same read? if not how can I get the corresponding Q and L values for the same read? (can we somehow keep the ID of each read in a separate column in the reports to see what value belongs to what read?
Thanks for your replay