Eric Cox

Hi @mverce, Thanks for your report. I wasn't able to reproduce this error and we think you may have encountered a temporary problem. If you don't mind trying this one...

Hi @joegeorgeson, Thanks for opening this issue. We're going to look into matching the file permissions to the user default permissions. Best, Eric Eric Cox, PhD [Contractor] (he/him/his) NCBI Datasets...

Hi @Jtrachsel, Thanks for opening this issue. I was able to reproduce this bug and we are going to investigate. In the meantime, you can obtain the metadata for this...

Hi @Jtrachsel, This bug has been fixed in the latest version of the CLI, `16.17.1` For example: ``` datasets --version; datasets summary genome taxon 2964429 --as-json-lines | dataformat tsv genome...

Hi @carolinasisco, I'm opening a new issue since this is a separate problem from #360. We are continuing to investigate. Best, Eric Eric Cox, PhD [Contractor] (he/him/his) NCBI Datasets NIH/NLM/NCBI...

Hi @carolinasisco, Download failures for WP accessions annotated on large numbers of genomes is a known problem and we are continuing to research ways to make this work. For example,...

That's helpful information. From the list of 50 WP accessions in your list, I found 4 WPs that are annotated on PA14 genomes: WP_003088572.1, WP_003101261.1, WP_003109333.1, WP_003138346.1 Normally, I would...

Hi @gabepen, Thanks for your comment. We haven't had a chance to look into this yet due to other institutional priorities. Just to confirm, are you interested in downloading all...

Thanks @gabepen. >I've tested the --taxon-filter option and still get the zip archive error for a single sequence. Good point. We are going to release a fix for this bug...

Hi @carolinasisco and @gabepen, Thanks for your patience. Here's an update: 1. We are continuing to investigate how to better support requests for large numbers of genome sequences (10 k+)...