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A computational methods and simulation toolkit

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TwoPhaseFlow app runs the setup files by means of importing them as a python module in parun. Absolute and relative path capability in parun could be added. This helps, for...

discussion
enhancement

When running the Proteus tests via `make test`, there are a lot of mesh (and other) files that are created during this process. All these files clutter the Proteus directory...

discussion
testing_framework

Just wanted to throw this out as a possibility to achieve tests in parallel: https://pytest-mpi.readthedocs.io/en/latest/

enhancement
testing_framework

Many of the hpc machines have required local config changes, which we include in proteus/config/MACHINE.py. While the require changes are becoming less invasive, we are running into more users who...

enhancement

- [ ] replace whole file/subdir skipping with finer-grained pytest skip statements - [ ] remove logic in makefile once os command line looks same as linux - [ ]...

enhancement

This issue is meant to track the migration of the mprans module to `xtensor`. This will be splitted in many steps to ease the merge of PRs and avoid having...

When we run with the PUMI workflow for existing domain/mesh types, we need to run an unmodified input file to generate the mesh and let PUMI build its own representation...

enhancement

@JohanMabille I was doing some local testing of the RANS3PSed class (just merged your PR #1133) and noticed some 2D calls in the 3D pybind11 wrappers: ```bash $ grep init_RANS...

discussion

The following tests were turned off as they depended on large file sizes (>100kB): **1MB proteus/tests/STLBlocks.stl** proteus/tests/test_spatialtools.py::TestShapeDomainBuilding::test_BC_flags proteus/tests/test_spatialtools.py::TestShapeDomainBuilding::test_assemble_domain proteus/tests/test_spatialtools.py::TestShapeDomainBuilding::test_create_shapes **400kB proteus/tests/TwoPhaseFlow/comparison_files/comparison_fillingTank_velocity_t2.csv** proteus/tests/TwoPhaseFlow/test_TwoPhaseFlow.py::TestTwoPhaseFlow::test_fillingTank **20MB proteus/tests/amg_tests/import_modules/saddle_point_mat_1 1MB proteus/tests/amg_tests/import_modules/bcw_matrix_1** proteus/tests/amg_tests/test_amg_methods.py::test_amg_iteration_matrix_1 proteus/tests/amg_tests/test_amg_methods.py::test_amg_iteration_matrix_2 **1.3MB proteus/tests/solver_tests/import_modules/saddle_point_matrix.bin...

Need to refactor interface to pass grading factor through to analytic geometry section.