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Published 20 hours ago • verified publisher icon epurdom

Support BiocParallel?

Open seandavi opened this issue 9 years ago • 2 comments

Does BiocParallel allow you any more flexibility, particularly for larger datasets or parameter spaces.

seandavi avatar Jun 25 '16 21:06 seandavi

I forgot to mention it, but currently we're using mclapply in clusterMany()

I agree that switching to BiocParallel would be a good idea.

Off-topic, but scone does use BiocParallel :)

drisso avatar Jun 25 '16 23:06 drisso

I had noticed the mclapply call after I went looking for a parallel implementation of RSEC.

On Jun 25, 2016, at 4:04 PM, Davide Risso [email protected] wrote:

I forgot to mention it, but currently we're using mclapply in clusterMany()

I agree that switching to BiocParallel would be a good idea.

Off-topic, but scone does use BiocParallel :)

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seandavi avatar Jun 25 '16 23:06 seandavi