[NGS Portal] Pipeline run's report documents

[NShaforostov]

Background

During pipeline execution, many different auxiliary output documents may be generated. Once pipeline is completed, user might want to view/preview such documents or download them to work with later. As these documents can be located in different places of the pipeline working/output directory and it can be hard to find files of interest manually, it would be useful to implement a separate previewer for pipeline output documents.

Approach

On the Run logs page of the pipeline, a new tab shall be added - Reports. This tab shall have a view like:

Tab shall contain a list of documents from the pipeline's output directory:

• list shall include only documents loaded via PipelineResult storage rules (for more details see #3906)
• documents shall be grouped by storage rules by which they were loaded

List shall have a table view with the following columns:

• Name - name of the PipelineResult storage rule by which documents were loaded
• Path - list of full paths of documents loaded via the corresponding PipelineResult storage rule
  • each path shall be presented as hyperlink - by click it, a corresponding document shall be opened in a preview pop-up (see below)
  • if the list of documents is too large (more then N documents for a rule, where N is defined from preferences) then only several documents shall be shown, other documents shall hidden and a control with the count of hidden paths shall be shown. By click such control, list of hidden document shall be shown in a tooltip, e.g.:

Table shall support sorting by the Name column.

By click any document path, the pop-up with document preview shall be opened. This pop-up shall look like:

Pop-up shall include:

• details section:
  • labels with the document name (name of the PipelineResult storage rule by which that document was loaded) and path
  • button to open current document in a new tab
  • button to download a raw file of the current document to the user workstation
• preview section - main section with the document preview. At least the following types and viewer shall be supported:
  • TSV, CSV - shall be shown as a formatted table. Sorting by columns shall be supported. Pagination shall be supported for large tables
  • PDF - shall be shown in a web PDF-viewer inside a frame
  • PNG - shall be shown as image inside a frame
  • HTML - shall be shown as formatted HTML-page inside a frame
  • for unsupported documents types:
    • notification shall be shown about the impossibility of previewing and a suggestion to download the document
    • button to open a document in a new tab shall be disabled