cloud-pipeline icon indicating copy to clipboard operation
cloud-pipeline copied to clipboard

[S2] Upload Seq file to AWS Omics Store with JS SDK

Open SilinPavel opened this issue 1 year ago • 0 comments
trafficstars

Should be done with a new form on AWS Seq Store view: fields:

  • File type (BAM, CRAM, UBAM, FASTQ)
  • Reference from ref storage (required for BAM and CRAM),
  • Name (str)
  • Description (str)
  • SampleID (str),
  • SubjectID (str)
  • GeneratedFrom (str)

Implementation through: https://docs.aws.amazon.com/AWSJavaScriptSDK/latest/AWS/Omics.html https://docs.aws.amazon.com/omics/latest/dev/synchronous-uploads.html

SilinPavel avatar Apr 05 '24 09:04 SilinPavel