endrebak.ada
endrebak.ada
The method should simply return whether an interval with the same positions already exists or not. It should possibly also return a duplication id so that each interval gets its...
``` import pyranges as pr gr = pr.from_dict({'Chromosome': [1, 1, 1, 1], 'Start': [10, 12, 12, 30], 'End': [20, 18, 18, 50], 'Strand': ['+', '+', '+', '+'], 'Id': ['interv1', 'interv2',...
Figure out how to do this :)
``` import pyranges as pr import pandas as pd df = pd.DataFrame({"A1": [1, 2] * 5000, "A2": [3, 4, 5, 6] * 2500}) gr = pr.data.chipseq() gr.insert(df, 0) # +--------------+-----------+-----------+-----------+------------+-----------+--------------+-----------+...
The old travis-ci one says build failing
What to do? Remove the option? Have it default to 1? Try to update my code to support the changed ray (even though nb_cpu is never worth using, really)?