bleh

Training/Validating on Custom Datasets (In Classic COCO Segmentation Format)

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Hi all, Does this repo support training on a custom dataset? Or better still, has anyone successfully done so? I have a dataset in classic coco [format](https://cocodataset.org/#format-data) which I am...

When `gt` and `pd` are exactly the same and filled with the same value `val`, [compute_dice](https://github.com/frankkramer-lab/MIScnn/blob/master/miscnn/evaluation/detailed_validation.py#L72) returns NaN for the classes that are not the value `val`. This is due...

How to visualise my training dataset to confirm it is being correctly loaded?

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``` ct_scans/ scan_a/ segmentation.nii.gz imaging.nii.gz scan_b/ segmentation.nii.gz imaging.nii.gz scan_c/ segmentation.nii.gz imaging.nii.gz ``` Above is the file structure of my dataset where segmentation.nii.gz and imaging.nii.gz are 3D NIFTI files with multiple...

Bug in split_validation

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There is a bug in `split_validation()`: At this [line](https://github.com/frankkramer-lab/MIScnn/blob/master/miscnn/evaluation/split_validation.py#L73), we create `cb_list` based on `save_models` but we never pass it to `model.evaluate()`. This means that your model will never be...