Emil Hägglund

icon company Olink icon location Uppsala icon location Bioinformatics and data analytics, PhD in Molecular Evolution. Currently employed by Olink.

Results 3 comments of Emil Hägglund

failed to build index

``` > graphmap align -I -r reference.fna [10:42:58 BuildIndexes] Loading reference sequences. [10:43:42 SetupIndex_] Building the index for shape: '11110111101111'. [10:44:23 Create] Allocated memory for a list of 2138863289 seeds...

Failed building databases using GTDB-taxdump taxonomy files

Ah, suspected it was something like this. Then I know the cause of the error. Thanks for the quick reply!

Rerooting branch support value problem

Hi, I think this is the correct behaviour since with `format=1` the values are not interpreted as support values but node names and therefore should be moved on rerooting, and...