foca

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Implement client for default permission endpoints

2

Currently, we have kept the default permission endpoints as fixed paths. Instead, we should probably focus on adding a client for the default API, and for that, we know the...

kushagra189

Self assigning owner permissions for a given resource

1

Currently, we need to manually set permissions for a given resource. However, if the user has himself created a resource, he should have access to permission management for that given...

kushagra189

Feature enhancement ft. access control

1

This issue is being created to cumulate all the subsequent pending issues with access control feature enhancement with the intent to track them all together. New issues, if required must...

kushagra189

Replace boilerplate code with FOCA and test functionality in the following apps: - [ ] [**cwl-WES**](https://github.com/elixir-cloud-aai/cwl-WES) (elixir-cloud-aai/cwl-WES#153) - [x] [**proWES**](https://github.com/elixir-cloud-aai/proWES) (elixir-cloud-aai/proWES#10) - [x] [**proTES**](https://github.com/elixir-cloud-aai/proTES) (elixir-cloud-aai/proTES#55) Note that this is a...

uniqueg

Guard function against code injection, see https://github.com/elixir-cloud-aai/drs-filer/issues/54 Remove `eval` and instead require callers to provide a literal string of allowed chars to `charset`, e.g., `0123456789ABCDEF`.

uniqueg

feat: simplify exceptions handling API

2

The [`ExceptionConfig()` model/API](https://github.com/elixir-cloud-aai/foca/blob/f8699377c862d3d5479652207ec5f0419bf987a6/foca/models/config.py#L192-L440) is unnecessarily complicated. Simplify with a focus on usability.

uniqueg

See security vulnerability for `Werkzeug` here: https://github.com/advisories/GHSA-2g68-c3qc-8985 Upgrade `Werkzeug` and, while we are at it, also upgrade Flask, each to the latest version.

uniqueg

ci: enforce code style with Black

2

Use [Black](https://black.readthedocs.io/en/stable/) to auto-format code and include check in CI workflow.

uniqueg

Use [Pylint](https://pylint.org//) to refactor code and include check in CI workflow.

uniqueg

Use [`flake8-docstrings`](https://black.readthedocs.io/en/stable/) (and potentially [`flake8-docstrings-complete`](https://pypi.org/project/flake8-docstrings-complete/)) for implementing best docstring practices and include check in CI workflow.

uniqueg