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Give new database IDs to the kegg_additions

Open eladnoor opened this issue 5 years ago • 1 comments

Now, we issue "fake" IDs that look like KEGG, with high numbers (e.g. C80067). This is confusing and should be changed to something like COCO:C00001 (COCO for COmponent-COntribution).

eladnoor avatar Nov 10 '18 12:11 eladnoor

This options will be used only in cases where the compound has no InChI and cannot be found in any of the standard databases. For example, "a quinone" is a class of compounds and therefore has no InChI, however we can use the MetaNetX identifier MNXM2499 instead of defining a new one.

eladnoor avatar Nov 18 '18 15:11 eladnoor