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Problem running emapper.py and download bact arch viruses

Open xjhzjucas opened this issue 1 year ago • 1 comments

Dear authors: I encountered a problem running emapper.py when I used command as follow: emapper.py -i abc.fa -o k -m diamond --cpu 64 --dmnd_db /db/eggnog/ it turns out :Database bact not present. Use "hmmpress" to create the .h3* files how can I get the bact db? I install the database using command:download_eggnog_data.py -y -f --data_dir db/eggnog

thank you very much !

xjhzjucas avatar Nov 28 '23 12:11 xjhzjucas

Hi @xjhzjucas ,

First of all, what kind of search are you trying to do? Do you wish to use diamond or hmmer? Do you need the CLI version or would be the web version useful for you also? How did you install eggnog-mapper? Which version is it?

Best, Carlos

Cantalapiedra avatar Dec 14 '23 16:12 Cantalapiedra