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                                            Nathan Edwards

Empty output

Hi MJ, I'm sorry you are still having trouble. I see that you didn't set a valid barcodes file on the command-line, in which case the default filename barcodes.tsv is...

Empty output

@MJ-1987 is SCReadCounts working for you now? I was hoping that if you turned off the valid barcodes option that you’d see whether CellRanger output the barcodes in the format...