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findPaths: argument 1 is not a vector
HI,
I'm trying to find paths for my custom_clusters, that are added to the cellrouter@sampTab:
cellrouter <- findPaths(cellrouter, column='custom_clusters', libdir, paste(getwd(), 'results/paths', sep='/'), method="graph")
and it generates an error:
Error in order(tmp2$value, decreasing = TRUE) : argument 1 is not a vector
How could I resolve the issue?
Thank you, Araks
Sorry for my delayed response.
Can you please provide me some more code to better track your issue?
Did you successfully generated the plot from the plotKNN function? I suspect the cell_edge_weighted_network.txt might somehow be empty.
Thanks!
On Wed, May 8, 2019 at 5:56 AM Araks Martirosyan [email protected] wrote:
HI,
I'm trying to find paths for my custom_clusters, that are added to the cellrouter@sampTab:
cellrouter <- findPaths(cellrouter, column='custom_clusters, libdir, paste(getwd(), 'results/paths', sep='/'), method="graph")
and it generates an error:
Error in order(tmp2$value, decreasing = TRUE) : argument 1 is not a vector
How could I resolve the issue?
Thank you, Araks
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