ciftify
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edickie
The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets
I run the ciftify_statclust_report command with a self-downsampled surface(10k per hemisphere) and the overlap information with the atlases in the csv report looks inaccurate, is this situation about the mismatch...
The major bottleneck in ciftify_recon_all is the msm registration (which is single threaded). I can cut the processing time in half by just forcing both hemispheres to run at the...
There also appears to be a bug with ciftify_clean_img in the case where --detrend and/or --scale are set to True but not confounds are given. In this case, nilearn ends...
Writing this here so I remember: - [ ] parser that print adds the log info and setting to the QA pages like in fmriprep - [ ] maybe a...
I currently makes a bunch of python error madness.. not very nice for the user
This is a QC scene for the HCP Pipelines - [ ] integrate the views (especially MSMSulc & Myelin related ones) - [ ] retest that the scene export works..as...
We are adding MSM as a dependancy. Note this from T. Coalson: > Just a reminder: the MSM code/binary is forbidden from commercial use (similar to FSL), because of the...
Please specify that the argument should contain the path of the output folder and the subject ID. E.g. /path/to/output/SubjID
