ciftify icon indicating copy to clipboard operation
ciftify copied to clipboard

fmriprep_ciftify BIDS-App does not start

Open StephDocTUM opened this issue 4 years ago • 0 comments

Hi,

running: docker run -ti --rm -v /home/neurolab2/Schreibtisch/Stephan/Programmes/freesurfer/license.txt:/fslicense.txt:ro -v /home/neurolab2/Schreibtisch/Drmed/final_GSP:/data:ro -v /home/neurolab2/Schreibtisch/Drmed/final_ciftify_GSP:/out tigrlab/fmriprep_ciftify:latest /data /out/out participant --participant_label=1 --read-from-derivatives /home/neurolab2/Schreibtisch/Drmed/final_GSP/derivatives --resample-to-T1w32k --anat_only --fs-license /fslicense.txt --n_cpus 4

creates the output folder, but does not continue to produce any output. No errors are shown in the terminal and it is running forever. Any ideas?

Best,

StephDocTUM avatar Nov 27 '20 15:11 StephDocTUM