container-template
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ecohealthalliance
Containerised R workflow template
We had been waiting until quarto had a flexdashboard replacement, but as we don't really use flexdashboard a lot, and new quarto features are emerging, we should have a quarto...
Issue to right-size and create PR request from existing fork. Key features for minimum PR: - [ ] R function / RStudio package template setup that creates package, installs packages...
When the auto-snapshot config option is TRUE, job succeeds but fails to install any package other than `renv` causing everything downstream to break. Gives a warning about `yaml` not being...
The example report has a lot of speciality packages that could be removed to make a more general workflow. This would make the template easier to build off because subsequent...
Blastula depends on Less Secure Apps to send emails via gmail. On 30 May 2022 google will no longer support this feature. App passwords will continue to work. Jacqueline Nolis...
- See https://gist.github.com/philip-gai/2b21293b178aa6ea6903e99cc1c32c4f for an action that modifies secrets - After git-crypt unlocking (in the same step), run a loop over the lines in `.env` adding all variables to secrets...
Just making a few notes - [ ] Standard (ruODK) fetching tools - [ ] ODK/EpiCollect-to-AirTable workflows - [ ] OK, once we have a few of these, there's some...
When I used the template for my M3 talk example and when I created the `nipah-bangladesh--automation`, I had to rename the `.Rproj` file to the name of the new repository...
- [ ] Bring in container-building actions from https://github.com/noamross/reprotemplate - [ ] Set up optional actions so that IF there is a `Dockerfile`, the docker image is built and pushed...