cnn4brca
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ecobost
how to run your code?
hello, I am interest at your code. But how to run your code? can you give some advice？ beside, can you provide some trainning data?
I added some code on how to run in the README.md: https://github.com/ecobost/cnn4brca
@ecobost thank your response. can you provide a good pre-trained model? thank you very much!
@IvyGongoogle did u get the database ? i asked them but they didn't reply !
did u try the code with other dataBase ? can we try it with the MIAS data base ??
@Maya1994 Hi, people at BCDR do take some time to answer, I have not tried to run this code in a different database but it should be possible although with some modifications
@ecobost here is an example of mammograms that I have, as I told you i'm interested with microcalcification detection,
You asked me before to generate masks first , but how can I do it ? as u said in ur previous comment : " what createMask.m does is take an outline (a series of x,y coordinates) and creates the contour of the lesion from it" but i don't have this x and y !!!
Many Thanks,
Do you have any ground truth of where the lesions are? that has to be provided to the network as the label for training otherwise it will have no examples to learn from. If you do have some ground truth as masks, outlines or any other form, then you would have to change it to the form used by the code (with 0 for background, 127 for normal tissue and 255 for the lesion/positive class). This should probably come with the dataset (and are usually provided by trained radiologists), if you do want to label the images yourself you could try using labelme or sloth (I haven't used them but they seem relatively easy to use)
hey are you run the whole code.? the code gives some error when i run . please help if you know.?
