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CHEBI uses a mixture of Drug_Central and DrugCentral

Open cmungall opened this issue 11 months ago • 2 comments

CHEBI uses Drug_Central from term xrefs and DrugCentral for synonym xrefs

e.g.

https://www.ebi.ac.uk/ols4/ontologies/chebi/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCHEBI_94531

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bioregistry has https://bioregistry.io/registry/drugcentral, with no preferred prefix.

I recommend using prefixes from bioregistry and using OAK to validate mappings.

cmungall avatar Mar 27 '24 00:03 cmungall

Thanks Chris for bringing this to our attention. We will implement this when we start working on the new curator tool for ChEBI (hopefully in the next few weeks).

amalik01 avatar Mar 27 '24 16:03 amalik01

@amalik01 I am working on this, validating the prefix provided by the Bioregistry portal, a solution will be included in the new ontology files: https://ftp.ebi.ac.uk/pub/databases/chebi-2

CarMoreno avatar Jul 08 '24 18:07 CarMoreno