easybuild-easyconfigs
easybuild-easyconfigs copied to clipboard
Published
20 hours ago •
easybuilders
easybuilders
{lib}[foss/2021b] DeepLabCut v2.2.3 w/ Python 3.9.6
(created using eb --new-pr)
Requires:
- [x] PR #16393
- [x] PR #16392
- [ ] PR #16385
- [ ] PR #16266
@sassy-crick: Tests failed in GitHub Actions, see https://github.com/easybuilders/easybuild-easyconfigs/actions/runs/3263959793 Output from first failing test suite run:
ERROR: test_dep_versions_per_toolchain_generation (test.easyconfigs.easyconfigs.EasyConfigTest)
----------------------------------------------------------------------
Traceback (most recent call last):
File "test/easyconfigs/easyconfigs.py", line 837, in test_dep_versions_per_toolchain_generation
for ec in self.ordered_specs:
File "test/easyconfigs/easyconfigs.py", line 278, in ordered_specs
EasyConfigTest.resolve_all_dependencies()
File "test/easyconfigs/easyconfigs.py", line 216, in resolve_all_dependencies
cls._parsed_easyconfigs, modules_tool(), retain_all_deps=True)
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 461, in resolve_dependencies
raise_error_missing_deps(totally_missing, extra_msg="no easyconfig file or existing module found")
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 324, in raise_error_missing_deps
raise EasyBuildError(error_msg)
EasyBuildError: 'Missing dependencies: wxPython/4.2.0-foss-2021b, PyTorch/1.11.0-foss-2021b-CUDA-11.4.1 (no easyconfig file or existing module found)'
======================================================================
FAIL: test__parse_easyconfig_DeepLabCut-2.2.3-foss-2021b-CUDA-11.4.1.eb (test.easyconfigs.easyconfigs.EasyConfigTest)
Test for easyconfig DeepLabCut-2.2.3-foss-2021b-CUDA-11.4.1.eb
----------------------------------------------------------------------
Traceback (most recent call last):
File "test/easyconfigs/easyconfigs.py", line 1502, in innertest
template_easyconfig_test(self, spec_path)
File "test/easyconfigs/easyconfigs.py", line 1477, in template_easyconfig_test
self.fail(error_msg)
AssertionError: use of `True` to indicate the system toolchain for dependency CUDA is deprecated, use the `SYSTEM` template constant instead
======================================================================
FAIL: test_pr_python_packages (test.easyconfigs.easyconfigs.EasyConfigTest)
Several checks for easyconfigs that install (bundles of) Python packages.
----------------------------------------------------------------------
Traceback (most recent call last):
File "test/easyconfigs/easyconfigs.py", line 1061, in test_pr_python_packages
self.fail('\n'.join(failing_checks))
AssertionError: sanity_pip_check should be enabled in DeepLabCut-2.2.3-foss-2021b-CUDA-11.4.1.eb
----------------------------------------------------------------------
Ran 15503 tests in 551.469s
FAILED (failures=2, errors=1)
ERROR: Not all tests were successful
bleep, bloop, I'm just a bot (boegelbot v20200716.01)
Please talk to my owner @boegel if you notice you me acting stupid),
or submit a pull request to https://github.com/boegel/boegelbot fix the problem.
@sassy-crick: Tests failed in GitHub Actions, see https://github.com/easybuilders/easybuild-easyconfigs/actions/runs/3264426853 Output from first failing test suite run:
ERROR: test_conflicts (test.easyconfigs.easyconfigs.EasyConfigTest)
Check whether any conflicts occur in software dependency graphs.
----------------------------------------------------------------------
Traceback (most recent call last):
File "test/easyconfigs/easyconfigs.py", line 326, in test_conflicts
self.assertFalse(check_conflicts(self.ordered_specs, modules_tool(), check_inter_ec_conflicts=False),
File "test/easyconfigs/easyconfigs.py", line 278, in ordered_specs
EasyConfigTest.resolve_all_dependencies()
File "test/easyconfigs/easyconfigs.py", line 216, in resolve_all_dependencies
cls._parsed_easyconfigs, modules_tool(), retain_all_deps=True)
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 461, in resolve_dependencies
raise_error_missing_deps(totally_missing, extra_msg="no easyconfig file or existing module found")
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 324, in raise_error_missing_deps
raise EasyBuildError(error_msg)
EasyBuildError: 'Missing dependencies: wxPython/4.2.0-foss-2021b, PyTorch/1.11.0-foss-2021b-CUDA-11.4.1 (no easyconfig file or existing module found)'
======================================================================
ERROR: test_dep_graph (test.easyconfigs.easyconfigs.EasyConfigTest)
Unit test that builds a full dependency graph.
----------------------------------------------------------------------
Traceback (most recent call last):
File "test/easyconfigs/easyconfigs.py", line 313, in test_dep_graph
dep_graph(fn, self.ordered_specs)
File "test/easyconfigs/easyconfigs.py", line 278, in ordered_specs
EasyConfigTest.resolve_all_dependencies()
File "test/easyconfigs/easyconfigs.py", line 216, in resolve_all_dependencies
cls._parsed_easyconfigs, modules_tool(), retain_all_deps=True)
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 461, in resolve_dependencies
raise_error_missing_deps(totally_missing, extra_msg="no easyconfig file or existing module found")
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 324, in raise_error_missing_deps
raise EasyBuildError(error_msg)
EasyBuildError: 'Missing dependencies: wxPython/4.2.0-foss-2021b, PyTorch/1.11.0-foss-2021b-CUDA-11.4.1 (no easyconfig file or existing module found)'
======================================================================
ERROR: test_dep_versions_per_toolchain_generation (test.easyconfigs.easyconfigs.EasyConfigTest)
----------------------------------------------------------------------
Traceback (most recent call last):
File "test/easyconfigs/easyconfigs.py", line 837, in test_dep_versions_per_toolchain_generation
for ec in self.ordered_specs:
File "test/easyconfigs/easyconfigs.py", line 278, in ordered_specs
EasyConfigTest.resolve_all_dependencies()
File "test/easyconfigs/easyconfigs.py", line 216, in resolve_all_dependencies
cls._parsed_easyconfigs, modules_tool(), retain_all_deps=True)
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 461, in resolve_dependencies
raise_error_missing_deps(totally_missing, extra_msg="no easyconfig file or existing module found")
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 324, in raise_error_missing_deps
raise EasyBuildError(error_msg)
EasyBuildError: 'Missing dependencies: wxPython/4.2.0-foss-2021b, PyTorch/1.11.0-foss-2021b-CUDA-11.4.1 (no easyconfig file or existing module found)'
----------------------------------------------------------------------
Ran 15503 tests in 1034.285s
FAILED (errors=3)
ERROR: Not all tests were successful
bleep, bloop, I'm just a bot (boegelbot v20200716.01)
Please talk to my owner @boegel if you notice you me acting stupid),
or submit a pull request to https://github.com/boegel/boegelbot fix the problem.
@sassy-crick: Tests failed in GitHub Actions, see https://github.com/easybuilders/easybuild-easyconfigs/actions/runs/3314898453 Output from first failing test suite run:
ERROR: test_conflicts (test.easyconfigs.easyconfigs.EasyConfigTest)
Check whether any conflicts occur in software dependency graphs.
----------------------------------------------------------------------
Traceback (most recent call last):
File "test/easyconfigs/easyconfigs.py", line 326, in test_conflicts
self.assertFalse(check_conflicts(self.ordered_specs, modules_tool(), check_inter_ec_conflicts=False),
File "test/easyconfigs/easyconfigs.py", line 278, in ordered_specs
EasyConfigTest.resolve_all_dependencies()
File "test/easyconfigs/easyconfigs.py", line 216, in resolve_all_dependencies
cls._parsed_easyconfigs, modules_tool(), retain_all_deps=True)
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 461, in resolve_dependencies
raise_error_missing_deps(totally_missing, extra_msg="no easyconfig file or existing module found")
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 324, in raise_error_missing_deps
raise EasyBuildError(error_msg)
EasyBuildError: 'Missing dependencies: wxPython/4.2.0-foss-2021b, PyTorch/1.11.0-foss-2021b-CUDA-11.4.1, MoviePy/1.0.3-foss-2021b (no easyconfig file or existing module found)'
======================================================================
ERROR: test_dep_graph (test.easyconfigs.easyconfigs.EasyConfigTest)
Unit test that builds a full dependency graph.
----------------------------------------------------------------------
Traceback (most recent call last):
File "test/easyconfigs/easyconfigs.py", line 313, in test_dep_graph
dep_graph(fn, self.ordered_specs)
File "test/easyconfigs/easyconfigs.py", line 278, in ordered_specs
EasyConfigTest.resolve_all_dependencies()
File "test/easyconfigs/easyconfigs.py", line 216, in resolve_all_dependencies
cls._parsed_easyconfigs, modules_tool(), retain_all_deps=True)
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 461, in resolve_dependencies
raise_error_missing_deps(totally_missing, extra_msg="no easyconfig file or existing module found")
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 324, in raise_error_missing_deps
raise EasyBuildError(error_msg)
EasyBuildError: 'Missing dependencies: wxPython/4.2.0-foss-2021b, PyTorch/1.11.0-foss-2021b-CUDA-11.4.1, MoviePy/1.0.3-foss-2021b (no easyconfig file or existing module found)'
======================================================================
ERROR: test_dep_versions_per_toolchain_generation (test.easyconfigs.easyconfigs.EasyConfigTest)
----------------------------------------------------------------------
Traceback (most recent call last):
File "test/easyconfigs/easyconfigs.py", line 839, in test_dep_versions_per_toolchain_generation
for ec in self.ordered_specs:
File "test/easyconfigs/easyconfigs.py", line 278, in ordered_specs
EasyConfigTest.resolve_all_dependencies()
File "test/easyconfigs/easyconfigs.py", line 216, in resolve_all_dependencies
cls._parsed_easyconfigs, modules_tool(), retain_all_deps=True)
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 461, in resolve_dependencies
raise_error_missing_deps(totally_missing, extra_msg="no easyconfig file or existing module found")
File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 324, in raise_error_missing_deps
raise EasyBuildError(error_msg)
EasyBuildError: 'Missing dependencies: wxPython/4.2.0-foss-2021b, PyTorch/1.11.0-foss-2021b-CUDA-11.4.1, MoviePy/1.0.3-foss-2021b (no easyconfig file or existing module found)'
----------------------------------------------------------------------
Ran 15563 tests in 1141.511s
FAILED (errors=3)
ERROR: Not all tests were successful
bleep, bloop, I'm just a bot (boegelbot v20200716.01)
Please talk to my owner @boegel if you notice you me acting stupid),
or submit a pull request to https://github.com/boegel/boegelbot fix the problem.
Closed as PR https://github.com/easybuilders/easybuild-easyconfigs/pull/16385 was closed and also super-seeded by merged PR https://github.com/easybuilders/easybuild-easyconfigs/pull/19166