easybuild-easyconfigs
easybuild-easyconfigs copied to clipboard
easybuilders
{bio}[foss/2019b] BRAKER v2.1.5, GeneMark-ET v4.65, spaln v2.4.03
@boegel: Request for testing this PR well received on generoso
PR test command 'EB_PR=12430 EB_ARGS= /apps/slurm/default/bin/sbatch --job-name test_PR_12430 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!
- exit code: 0
- output:
Submitted batch job 16402
Test results coming soon (I hope)...
- notification for comment with ID 802152879 processed
Message to humans: this is just bookkeeping information for me, it is of no use to you (unless you think I have a bug, which I don't).
@stevecdavis: Tests failed in GitHub Actions, see https://github.com/easybuilders/easybuild-easyconfigs/actions/runs/665546745 Output from first failing test suite run:
======================================================================
Failed to determine merge base (ec: 1, output: ''), falling back to specifying target branch develop
FAIL: test_dep_versions_per_toolchain_generation (test.easyconfigs.easyconfigs.EasyConfigTest)
Failed to determine merge base (ec: 1, output: ''), falling back to specifying target branch develop
----------------------------------------------------------------------
Traceback (most recent call last):
List of added easyconfig files in this PR:
File "test/easyconfigs/easyconfigs.py", line 537, in test_dep_versions_per_toolchain_generation
BRAKER-2.1.5-foss-2019b-Python-3.7.4.eb
self.assertFalse(multi_dep_vars, error_msg)
GeneMark-ET-4.65-GCCcore-8.3.0.eb
AssertionError: No multi-variant deps found for '^.*-(?P<tc_gen>201[89][ab]).*\.eb$' easyconfigs:
spaln-2.4.03-GCC-8.3.0.eb
found 2 variants of 'GeneMark-ET' dependency in easyconfigs using '2019b' toolchain generation
* version: 4.57; versionsuffix: as dep for set(['BRAKER-2.1.5-intel-2019b-Python-3.7.4.eb'])
* version: 4.65; versionsuffix: as dep for set(['BRAKER-2.1.5-foss-2019b-Python-3.7.4.eb'])
----------------------------------------------------------------------
Ran 11703 tests in 482.332s
FAILED (failures=1)
ERROR: Not all tests were successful.
bleep, bloop, I'm just a bot (boegelbot v20200716.01)
Please talk to my owner @boegel if you notice you me acting stupid),
or submit a pull request to https://github.com/boegel/boegelbot fix the problem.
@stevecdavis: Tests failed in GitHub Actions, see https://github.com/easybuilders/easybuild-easyconfigs/actions/runs/668004103 Output from first failing test suite run:
Failed to determine merge base (ec: 1, output: ''), falling back to specifying target branch develop
Failed to determine merge base (ec: 1, output: ''), falling back to specifying target branch develop
List of added easyconfig files in this PR:
======================================================================
FAIL: test_dep_versions_per_toolchain_generation (test.easyconfigs.easyconfigs.EasyConfigTest)
----------------------------------------------------------------------
Traceback (most recent call last):
File "test/easyconfigs/easyconfigs.py", line 537, in test_dep_versions_per_toolchain_generation
self.assertFalse(multi_dep_vars, error_msg)
AssertionError: No multi-variant deps found for '^.*-(?P<tc_gen>201[89][ab]).*\.eb$' easyconfigs:
found 2 variants of 'GeneMark-ET' dependency in easyconfigs using '2019b' toolchain generation
* version: 4.57; versionsuffix: as dep for set(['BRAKER-2.1.5-intel-2019b-Python-3.7.4.eb'])
* version: 4.65; versionsuffix: as dep for set(['BRAKER-2.1.5-foss-2019b-Python-3.7.4-GeneMark-ET-4.65.eb'])
----------------------------------------------------------------------
Ran 11706 tests in 489.336s
FAILED (failures=1)
ERROR: Not all tests were successful.
bleep, bloop, I'm just a bot (boegelbot v20200716.01)
Please talk to my owner @boegel if you notice you me acting stupid),
or submit a pull request to https://github.com/boegel/boegelbot fix the problem.
closing this since foss/2019b is no longer supported, see https://docs.easybuild.io/policies/toolchains