easybuild-easyblocks

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BinariesTarball inherits unused extra_options from Tarball

1

The Tarball EasyBlock defines two [extra_options](https://github.com/easybuilders/easybuild-easyblocks/blob/develop/easybuild/easyblocks/generic/tarball.py#L53-L61) `install_type` and `preinstall_cmd`. Besides a log message in run, the only place both are used is in the `install_step`. So far it is perfectly...

VRehnberg

JSONDecodeError when determining list of installed Python packages

2

It seems like `pip list ... --format json` sometimes returns nothing at all, which isn't being handled well. ``` == 2023-01-25 17:38:10,411 pythonpackage.py:455 INFO Running command '/apps/gent/RHEL8/cascadelake-ib/software/Python/3.10.4-GCCcore-11.3.0/bin/python -m pip list...

boegel

update RepeatModeler easyblock (repeatmodeler.py) for newer versions 2.0.3 and 2.0.4

1

Hi EB team, Two issues: **Issue 1:** RepeatModeler 2.0.3 and the latest version 2.0.4 changed the configure option from -trf_prgm to -trf_dir . To accommodate this change, a patch file...

zhuofeih

- Fix for database in the version 3.13. - Adding the option to compile with mpi,seriallization using a flag in the easyconfig: serialization=True or False

alikerr

enhance `LLVM` easyblock for compilation of clang/flang + other llvm-projects

22

This EB is a modified version of the current `Clang` one (whether to keep them separate, having a simpler EB for Clang-only, or rename Clang to LLVMcore or viceversa is...

Crivella

modification on mcr.py

1

Please modify line 87 of mcr.py file as follow: "agreeToLicense=Yes", to "agreeToLicense=yes", Apparently he new matlab compiler does not accept "Yes". It accept "yes" instead.

aroudgar

use relative paths to object files when compiling shared libraries in the OpenFOAM easyblock

5

In EESSI we ran into the following error when compiling OpenFOAM v2312 for Intel Skylake (see https://github.com/EESSI/software-layer/pull/563#issuecomment-2180005389): ``` make: /bin/sh: Argument list too long make: *** [/cvmfs/software.eessi.io/versions/2023.06/software/linux/x86_64/intel/skylake_avx512/software/OpenFOAM/v2312-foss-2023a/OpenFOAM-v2312/wmake/makefiles/general:210: /cvmfs/software.eessi.io/versions/2023.06/software/linux/x86_64/intel/skylake_avx512/software/OpenFOAM/v2312-foss-2023a/OpenFOAM-v2312/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so] Error 127...

bedroge

add custom easyblock for BLIS

2

(created using `eb --new-pr`)

wwweert123

Set `DEFCUDAVERSION` and `DEFSTDPARCOMPUTECAP` correctly in localrc for NVHPC

3

Without these changes those variables are not defined correctly. Example of the resulting difference: ```diff -set DEFCUDAVERSION=12.3; -set DEFSTDPARCOMPUTECAP=; +set DEFCUDAVERSION=12; +set DEFSTDPARCOMPUTECAP=80; ```

damianam

Failing IMPI sanity check due to UCX_TLS

2

On a Rocky 8.7 system with Intel cascade-lake CPUs I get a failing sanity check of IMPI/2021.10.0: > Abort(1615247) on node 0 (rank 0 in comm 0): Fatal error in...

Flamefire