Eduardo Andrés-León

You can merge them in a single html file: An example for 3 files: `ktImportText kraken.report1,name1 kraken.report2,name2 kraken.report3,name3 -o tmp.html`

I was wondering same thing

Haynes, thanks for the quick response. We are thinking of doing scRNA + ATAC of the same individuals so any advice is welcome.