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Published 20 hours ago • verified publisher icon dynverse

Zarr support

Open schienstockd opened this issue 3 years ago • 1 comments

Hello.

Out of interest, can you open and write zarr files with reticulate? We have a an R/Shiny image analysis application and would like to store the data as zarr. We currently use scanpy and h5 which is working. I found this github page that attempted to implement zarr for R: https://github.com/gdkrmr/zarr-R

I'm just curious if that could "just" work with reticulate or if there is a significant technical barrier?

Thanks!

schienstockd avatar Jul 01 '21 04:07 schienstockd

I see bindings here that call read_zarr and write_zarr methods from anndata(py), but is there a certain reason that these were commented out ?

Artur-man avatar Jul 19 '24 09:07 Artur-man