dxkeac

Hi,there is a problem about svviz2 in processing INS: svviz2.io.vcfparser - WARNING - SKIPPING VARIANT: chr1 90337 2 N TTGGAGGGAAGGACAGTCCTCTTGTCCCTCTGTCTCTTCCACACAGTTAACTGCGCT 63 PASS SUPP=1;SUPP_VEC=10;SVLEN=93;SVTYPE=INS;SVMETHOD=SURVIVOR1.0.7;CHR2=chr1;END=90410;CIPOS=0,0;CIEND=0,0;STRANDS=+- Could you help me explain this problem?...

A question about SVwiden

2

I want to use SVwiden to expand my VCF file, and I have ~9000 SVs, but the result file widened.vcf only got ~1000 SVs. The log file reported 2020/11/17 17:09:12...