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Hello @mikami520 Can you please post the command you've used?

Hi, Could you insert the line `print(data.shape)` to inspect data dimension at [https://github.com/MIC-DKFZ/nnUNet/blob/a7d1d875e8fc3f4e93ca7b51b1ba206711844d92/nnunet/preprocessing/cropping.py#L94](https://github.com/MIC-DKFZ/nnUNet/blob/a7d1d875e8fc3f4e93ca7b51b1ba206711844d92/nnunet/preprocessing/cropping.py#L94) and provide the output? Thank you.

Yes. You need to do `!pip install -e .` otherwise you can run the script directly using `python nnunet/experiment_planning/nnUNet_plan_and_preprocess.py -t 004 --verify_dataset_integrity` That data.shape should have 4 elements. If not,...

Thank you. I have so use this direct link to download the dataset zip file to gdrive using Colab.