autodE icon indicating copy to clipboard operation
autodE copied to clipboard

E/Z isomerisation/ double bond rotation reactions

Open ffmulks opened this issue 2 years ago • 2 comments

Hello again,

I ran into a reaction class that should be easy enough to implement but does not seem to be implemented at the moment:

C/C=C/C>>C/C=C\C

E/Z-isomerisation by double bond rotation. I am sure with the current framework that I can work around it, but the reaction optimiser should perhaps learn that?

All the best, Florian

ffmulks avatar Sep 01 '22 09:09 ffmulks

Hi – thanks for the suggestion 😄

Those kind of reactions weren't the initial target but definitely could be included, with a modest amount of effort. I don't have time to work on this right now but hopefully in the reasonably near future!

t-young31 avatar Sep 03 '22 09:09 t-young31

Well, I am not planning to touch a single quantum chemical input file anymore manually now that I have set up my group to work with autodE, so I will find the workarounds to do just about anything within the Python framework:D

Tom Young @.***> schrieb am Sa., 3. Sep. 2022, 18:15:

Hi – thanks for the suggestion 😄

Those kind of reactions weren't the initial target but definitely could be included, with a modest amount of effort. I don't have time to work on this right now but hopefully in the reasonably near future!

— Reply to this email directly, view it on GitHub https://github.com/duartegroup/autodE/issues/162#issuecomment-1236081188, or unsubscribe https://github.com/notifications/unsubscribe-auth/APEDKEUM6IKMOZKUISPFXR3V4MJKDANCNFSM6AAAAAAQCF6MHY . You are receiving this because you authored the thread.Message ID: @.***>

ffmulks avatar Oct 11 '22 07:10 ffmulks