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20 hours ago •
dsy109
dsy109
density plot for `gammamixEM` seems to be not implemented
Hi @dsy109 ,
Thank you for your work on mixtools. I came across the following issue. With the code below, I would expect to plot the density curves of the resulting gamma distributions. Instead I'm getting a plot of the log-likelihood of each iteration.
Looking at the source code of mixtools, it would seem that this is not implemented for gammamixEM? Is this intended? Or am I missing something?
Cheers,
Pepijn
library(mixtools)
#> mixtools package, version 2.0.0, Released 2022-12-04
#> This package is based upon work supported by the National Science Foundation under Grant No. SES-0518772 and the Chan Zuckerberg Initiative: Essential Open Source Software for Science (Grant No. 2020-255193).
set.seed(100)
x <- c(rgamma(200, shape = 0.2, scale = 14), rgamma(200,
shape = 32, scale = 10), rgamma(200, shape = 5, scale = 6))
out <- gammamixEM(x, lambda = c(1, 1, 1)/3, verb = TRUE)
#> number of iterations= 25
#> iteration = 1 log-lik diff = 1175.88 log-lik = -2608.276
#> iteration = 2 log-lik diff = 47.74193 log-lik = -2560.534
#> iteration = 3 log-lik diff = 10.27375 log-lik = -2550.26
#> iteration = 4 log-lik diff = 4.378686 log-lik = -2545.881
#> iteration = 5 log-lik diff = 2.703569 log-lik = -2543.178
#> iteration = 6 log-lik diff = 2.013168 log-lik = -2541.165
#> iteration = 7 log-lik diff = 1.657544 log-lik = -2539.507
#> iteration = 8 log-lik diff = 1.441377 log-lik = -2538.066
#> iteration = 9 log-lik diff = 1.293605 log-lik = -2536.772
#> iteration = 10 log-lik diff = 1.183348 log-lik = -2535.589
#> iteration = 11 log-lik diff = 1.095632 log-lik = -2534.493
#> iteration = 12 log-lik diff = 1.022566 log-lik = -2533.471
#> iteration = 13 log-lik diff = 0.9596622 log-lik = -2532.511
#> iteration = 14 log-lik diff = 0.9043369 log-lik = -2531.607
#> iteration = 15 log-lik diff = 0.8544442 log-lik = -2530.752
#> iteration = 16 log-lik diff = 0.8093044 log-lik = -2529.943
#> iteration = 17 log-lik diff = 0.7679066 log-lik = -2529.175
#> iteration = 18 log-lik diff = 0.7296704 log-lik = -2528.445
#> iteration = 19 log-lik diff = 0.6941591 log-lik = -2527.751
#> iteration = 20 log-lik diff = 0.6610344 log-lik = -2527.09
#> iteration = 21 log-lik diff = 0.6300273 log-lik = -2526.46
#> iteration = 22 log-lik diff = 0.6009192 log-lik = -2525.859
#> iteration = 23 log-lik diff = 0.5735289 log-lik = -2525.286
#> iteration = 24 log-lik diff = 0.5477037 log-lik = -2524.738
#> iteration = 25 log-lik diff = 0.523313 log-lik = -2524.215
#> iteration = 26 log-lik diff = 0.5002437 log-lik = -2523.714
#> iteration = 27 log-lik diff = 0.4783967 log-lik = -2523.236
#> iteration = 28 log-lik diff = 0.4576846 log-lik = -2522.778
#> iteration = 29 log-lik diff = 0.4380291 log-lik = -2522.34
#> iteration = 30 log-lik diff = 0.4193604 log-lik = -2521.921
#> iteration = 31 log-lik diff = 0.4015763 log-lik = -2521.519
#> iteration = 32 log-lik diff = 0.3847644 log-lik = -2521.134
#> iteration = 33 log-lik diff = 0.3686747 log-lik = -2520.766
#> iteration = 34 log-lik diff = 0.3533688 log-lik = -2520.412
#> iteration = 35 log-lik diff = 0.3387888 log-lik = -2520.074
#> iteration = 36 log-lik diff = 0.3248889 log-lik = -2519.749
#> iteration = 37 log-lik diff = 0.3116312 log-lik = -2519.437
#> iteration = 38 log-lik diff = 0.2989803 log-lik = -2519.138
#> iteration = 39 log-lik diff = 0.2869034 log-lik = -2518.851
#> iteration = 40 log-lik diff = 0.2753699 log-lik = -2518.576
#> iteration = 41 log-lik diff = 0.2643513 log-lik = -2518.312
#> iteration = 42 log-lik diff = 0.2538208 log-lik = -2518.058
#> iteration = 43 log-lik diff = 0.2437535 log-lik = -2517.814
#> iteration = 44 log-lik diff = 0.2341259 log-lik = -2517.58
#> iteration = 45 log-lik diff = 0.224916 log-lik = -2517.355
#> iteration = 46 log-lik diff = 0.2161031 log-lik = -2517.139
#> iteration = 47 log-lik diff = 0.2076678 log-lik = -2516.931
#> iteration = 48 log-lik diff = 0.1995918 log-lik = -2516.732
#> iteration = 49 log-lik diff = 0.1919381 log-lik = -2516.54
#> iteration = 50 log-lik diff = 0.184525 log-lik = -2516.355
#> iteration = 51 log-lik diff = 0.1774225 log-lik = -2516.178
#> iteration = 52 log-lik diff = 0.1706174 log-lik = -2516.007
#> iteration = 53 log-lik diff = 0.1641054 log-lik = -2515.843
#> iteration = 54 log-lik diff = 0.1578627 log-lik = -2515.685
#> iteration = 55 log-lik diff = 0.1518768 log-lik = -2515.533
#> iteration = 56 log-lik diff = 0.146136 log-lik = -2515.387
#> iteration = 57 log-lik diff = 0.1406293 log-lik = -2515.246
#> iteration = 58 log-lik diff = 0.135346 log-lik = -2515.111
#> iteration = 59 log-lik diff = 0.1302761 log-lik = -2514.981
#> iteration = 60 log-lik diff = 0.1254102 log-lik = -2514.855
#> iteration = 61 log-lik diff = 0.1207392 log-lik = -2514.735
#> iteration = 62 log-lik diff = 0.1162546 log-lik = -2514.618
#> iteration = 63 log-lik diff = 0.1119481 log-lik = -2514.506
#> iteration = 64 log-lik diff = 0.1078121 log-lik = -2514.399
#> iteration = 65 log-lik diff = 0.1038392 log-lik = -2514.295
#> iteration = 66 log-lik diff = 0.1000222 log-lik = -2514.195
#> iteration = 67 log-lik diff = 0.09635467 log-lik = -2514.098
#> iteration = 68 log-lik diff = 0.09283012 log-lik = -2514.006
#> iteration = 69 log-lik diff = 0.0894425 log-lik = -2513.916
#> iteration = 70 log-lik diff = 0.08618604 log-lik = -2513.83
#> iteration = 71 log-lik diff = 0.08305525 log-lik = -2513.747
#> iteration = 72 log-lik diff = 0.08004486 log-lik = -2513.667
#> iteration = 73 log-lik diff = 0.07714987 log-lik = -2513.59
#> iteration = 74 log-lik diff = 0.07436551 log-lik = -2513.515
#> iteration = 75 log-lik diff = 0.07168721 log-lik = -2513.444
#> iteration = 76 log-lik diff = 0.06911063 log-lik = -2513.375
#> iteration = 77 log-lik diff = 0.06663161 log-lik = -2513.308
#> iteration = 78 log-lik diff = 0.06424617 log-lik = -2513.244
#> iteration = 79 log-lik diff = 0.06195054 log-lik = -2513.182
#> iteration = 80 log-lik diff = 0.05974108 log-lik = -2513.122
#> iteration = 81 log-lik diff = 0.05761433 log-lik = -2513.064
#> iteration = 82 log-lik diff = 0.05556697 log-lik = -2513.009
#> iteration = 83 log-lik diff = 0.05359586 log-lik = -2512.955
#> iteration = 84 log-lik diff = 0.05169794 log-lik = -2512.904
#> iteration = 85 log-lik diff = 0.04987033 log-lik = -2512.854
#> iteration = 86 log-lik diff = 0.04811025 log-lik = -2512.806
#> iteration = 87 log-lik diff = 0.04641505 log-lik = -2512.759
#> iteration = 88 log-lik diff = 0.04478219 log-lik = -2512.714
#> iteration = 89 log-lik diff = 0.04320923 log-lik = -2512.671
#> iteration = 90 log-lik diff = 0.04169384 log-lik = -2512.629
#> iteration = 91 log-lik diff = 0.04023379 log-lik = -2512.589
#> iteration = 92 log-lik diff = 0.03882694 log-lik = -2512.55
#> iteration = 93 log-lik diff = 0.03747124 log-lik = -2512.513
#> iteration = 94 log-lik diff = 0.03616473 log-lik = -2512.477
#> iteration = 95 log-lik diff = 0.03490552 log-lik = -2512.442
#> iteration = 96 log-lik diff = 0.0336918 log-lik = -2512.408
#> iteration = 97 log-lik diff = 0.03252185 log-lik = -2512.376
#> iteration = 98 log-lik diff = 0.031394 log-lik = -2512.344
#> iteration = 99 log-lik diff = 0.03030666 log-lik = -2512.314
#> iteration = 100 log-lik diff = 0.0292583 log-lik = -2512.285
#> iteration = 101 log-lik diff = 0.02824746 log-lik = -2512.256
#> iteration = 102 log-lik diff = 0.02727271 log-lik = -2512.229
#> iteration = 103 log-lik diff = 0.02633272 log-lik = -2512.203
#> iteration = 104 log-lik diff = 0.02542618 log-lik = -2512.177
#> iteration = 105 log-lik diff = 0.02455186 log-lik = -2512.153
#> iteration = 106 log-lik diff = 0.02370854 log-lik = -2512.129
#> iteration = 107 log-lik diff = 0.02289508 log-lik = -2512.106
#> iteration = 108 log-lik diff = 0.02211038 log-lik = -2512.084
#> iteration = 109 log-lik diff = 0.02135338 log-lik = -2512.063
#> iteration = 110 log-lik diff = 0.02062305 log-lik = -2512.042
#> iteration = 111 log-lik diff = 0.01991842 log-lik = -2512.022
#> iteration = 112 log-lik diff = 0.01923854 log-lik = -2512.003
#> iteration = 113 log-lik diff = 0.01858252 log-lik = -2511.984
#> iteration = 114 log-lik diff = 0.01794947 log-lik = -2511.966
#> iteration = 115 log-lik diff = 0.01733727 log-lik = -2511.949
#> iteration = 116 log-lik diff = 0.01674776 log-lik = -2511.932
#> iteration = 117 log-lik diff = 0.0161788 log-lik = -2511.916
#> iteration = 118 log-lik diff = 0.01562965 log-lik = -2511.901
#> iteration = 119 log-lik diff = 0.01509961 log-lik = -2511.885
#> iteration = 120 log-lik diff = 0.01458799 log-lik = -2511.871
#> iteration = 121 log-lik diff = 0.01409501 log-lik = -2511.857
#> iteration = 122 log-lik diff = 0.01361816 log-lik = -2511.843
#> iteration = 123 log-lik diff = 0.01315782 log-lik = -2511.83
#> iteration = 124 log-lik diff = 0.0127134 log-lik = -2511.817
#> iteration = 125 log-lik diff = 0.01228434 log-lik = -2511.805
#> iteration = 126 log-lik diff = 0.01187007 log-lik = -2511.793
#> iteration = 127 log-lik diff = 0.01147009 log-lik = -2511.782
#> iteration = 128 log-lik diff = 0.01108387 log-lik = -2511.771
#> iteration = 129 log-lik diff = 0.01071093 log-lik = -2511.76
#> iteration = 130 log-lik diff = 0.0103508 log-lik = -2511.75
#> iteration = 131 log-lik diff = 0.01000302 log-lik = -2511.739
#> iteration = 132 log-lik diff = 0.009667163 log-lik = -2511.73
#> iteration = 133 log-lik diff = 0.009342803 log-lik = -2511.72
#> iteration = 134 log-lik diff = 0.009029536 log-lik = -2511.711
#> iteration = 135 log-lik diff = 0.008726973 log-lik = -2511.703
#> iteration = 136 log-lik diff = 0.008434736 log-lik = -2511.694
#> iteration = 137 log-lik diff = 0.008152465 log-lik = -2511.686
#> iteration = 138 log-lik diff = 0.00787981 log-lik = -2511.678
#> iteration = 139 log-lik diff = 0.007616434 log-lik = -2511.671
#> iteration = 140 log-lik diff = 0.007362015 log-lik = -2511.663
#> iteration = 141 log-lik diff = 0.007116239 log-lik = -2511.656
#> iteration = 142 log-lik diff = 0.006878806 log-lik = -2511.649
#> iteration = 143 log-lik diff = 0.006649424 log-lik = -2511.643
#> iteration = 144 log-lik diff = 0.006427816 log-lik = -2511.636
#> iteration = 145 log-lik diff = 0.006213711 log-lik = -2511.63
#> iteration = 146 log-lik diff = 0.006006848 log-lik = -2511.624
#> iteration = 147 log-lik diff = 0.005806978 log-lik = -2511.618
#> iteration = 148 log-lik diff = 0.005613859 log-lik = -2511.613
#> iteration = 149 log-lik diff = 0.005427258 log-lik = -2511.607
#> iteration = 150 log-lik diff = 0.005246949 log-lik = -2511.602
#> iteration = 151 log-lik diff = 0.005072716 log-lik = -2511.597
#> iteration = 152 log-lik diff = 0.004904351 log-lik = -2511.592
#> iteration = 153 log-lik diff = 0.00474165 log-lik = -2511.587
#> iteration = 154 log-lik diff = 0.004584421 log-lik = -2511.583
#> iteration = 155 log-lik diff = 0.004432475 log-lik = -2511.578
#> iteration = 156 log-lik diff = 0.004285631 log-lik = -2511.574
#> iteration = 157 log-lik diff = 0.004143714 log-lik = -2511.57
#> iteration = 158 log-lik diff = 0.004006557 log-lik = -2511.566
#> iteration = 159 log-lik diff = 0.003873996 log-lik = -2511.562
#> iteration = 160 log-lik diff = 0.003745875 log-lik = -2511.558
#> iteration = 161 log-lik diff = 0.003622041 log-lik = -2511.554
#> iteration = 162 log-lik diff = 0.00350235 log-lik = -2511.551
#> iteration = 163 log-lik diff = 0.003386661 log-lik = -2511.548
#> iteration = 164 log-lik diff = 0.003274836 log-lik = -2511.544
#> iteration = 165 log-lik diff = 0.003166745 log-lik = -2511.541
#> iteration = 166 log-lik diff = 0.003062261 log-lik = -2511.538
#> iteration = 167 log-lik diff = 0.002961262 log-lik = -2511.535
#> iteration = 168 log-lik diff = 0.00286363 log-lik = -2511.532
#> iteration = 169 log-lik diff = 0.00276925 log-lik = -2511.529
#> iteration = 170 log-lik diff = 0.002678013 log-lik = -2511.527
#> iteration = 171 log-lik diff = 0.002589812 log-lik = -2511.524
#> iteration = 172 log-lik diff = 0.002504546 log-lik = -2511.522
#> iteration = 173 log-lik diff = 0.002422113 log-lik = -2511.519
#> iteration = 174 log-lik diff = 0.002342421 log-lik = -2511.517
#> iteration = 175 log-lik diff = 0.002265375 log-lik = -2511.515
#> iteration = 176 log-lik diff = 0.002190886 log-lik = -2511.513
#> iteration = 177 log-lik diff = 0.00211887 log-lik = -2511.51
#> iteration = 178 log-lik diff = 0.002049241 log-lik = -2511.508
#> iteration = 179 log-lik diff = 0.001981921 log-lik = -2511.506
#> iteration = 180 log-lik diff = 0.001916832 log-lik = -2511.504
#> iteration = 181 log-lik diff = 0.001853899 log-lik = -2511.503
#> iteration = 182 log-lik diff = 0.001793049 log-lik = -2511.501
#> iteration = 183 log-lik diff = 0.001734213 log-lik = -2511.499
#> iteration = 184 log-lik diff = 0.001677323 log-lik = -2511.497
#> iteration = 185 log-lik diff = 0.001622315 log-lik = -2511.496
#> iteration = 186 log-lik diff = 0.001569124 log-lik = -2511.494
#> iteration = 187 log-lik diff = 0.001517691 log-lik = -2511.493
#> iteration = 188 log-lik diff = 0.001467957 log-lik = -2511.491
#> iteration = 189 log-lik diff = 0.001419864 log-lik = -2511.49
#> iteration = 190 log-lik diff = 0.001373359 log-lik = -2511.488
#> iteration = 191 log-lik diff = 0.001328387 log-lik = -2511.487
#> iteration = 192 log-lik diff = 0.001284899 log-lik = -2511.486
#> iteration = 193 log-lik diff = 0.001242845 log-lik = -2511.485
#> iteration = 194 log-lik diff = 0.001202176 log-lik = -2511.483
#> iteration = 195 log-lik diff = 0.001162847 log-lik = -2511.482
#> iteration = 196 log-lik diff = 0.001124813 log-lik = -2511.481
#> iteration = 197 log-lik diff = 0.001088031 log-lik = -2511.48
#> iteration = 198 log-lik diff = 0.00105246 log-lik = -2511.479
#> iteration = 199 log-lik diff = 0.001018059 log-lik = -2511.478
#> iteration = 200 log-lik diff = 0.0009847889 log-lik = -2511.477
#> iteration = 201 log-lik diff = 0.000952613 log-lik = -2511.476
#> iteration = 202 log-lik diff = 0.0009214947 log-lik = -2511.475
#> iteration = 203 log-lik diff = 0.0008913989 log-lik = -2511.474
#> iteration = 204 log-lik diff = 0.0008622916 log-lik = -2511.473
#> iteration = 205 log-lik diff = 0.0008341402 log-lik = -2511.472
#> iteration = 206 log-lik diff = 0.000806913 log-lik = -2511.472
#> iteration = 207 log-lik diff = 0.0007805794 log-lik = -2511.471
#> iteration = 208 log-lik diff = 0.0007551099 log-lik = -2511.47
#> iteration = 209 log-lik diff = 0.0007304758 log-lik = -2511.469
#> iteration = 210 log-lik diff = 0.0007066495 log-lik = -2511.469
#> iteration = 211 log-lik diff = 0.0006836043 log-lik = -2511.468
#> iteration = 212 log-lik diff = 0.0006613145 log-lik = -2511.467
#> iteration = 213 log-lik diff = 0.0006397551 log-lik = -2511.467
#> iteration = 214 log-lik diff = 0.000618902 log-lik = -2511.466
#> iteration = 215 log-lik diff = 0.0005987318 log-lik = -2511.465
#> iteration = 216 log-lik diff = 0.0005792221 log-lik = -2511.465
#> iteration = 217 log-lik diff = 0.0005603511 log-lik = -2511.464
#> iteration = 218 log-lik diff = 0.0005420977 log-lik = -2511.464
#> iteration = 219 log-lik diff = 0.0005244415 log-lik = -2511.463
#> iteration = 220 log-lik diff = 0.0005073629 log-lik = -2511.463
#> iteration = 221 log-lik diff = 0.000490843 log-lik = -2511.462
#> iteration = 222 log-lik diff = 0.0004748632 log-lik = -2511.462
#> iteration = 223 log-lik diff = 0.0004594058 log-lik = -2511.461
#> iteration = 224 log-lik diff = 0.0004444537 log-lik = -2511.461
#> iteration = 225 log-lik diff = 0.0004299901 log-lik = -2511.46
#> iteration = 226 log-lik diff = 0.0004159991 log-lik = -2511.46
#> iteration = 227 log-lik diff = 0.0004024652 log-lik = -2511.46
#> iteration = 228 log-lik diff = 0.0003893732 log-lik = -2511.459
#> iteration = 229 log-lik diff = 0.0003767087 log-lik = -2511.459
#> iteration = 230 log-lik diff = 0.0003644577 log-lik = -2511.459
#> iteration = 231 log-lik diff = 0.0003526066 log-lik = -2511.458
#> iteration = 232 log-lik diff = 0.0003411422 log-lik = -2511.458
#> iteration = 233 log-lik diff = 0.0003300519 log-lik = -2511.457
#> iteration = 234 log-lik diff = 0.0003193233 log-lik = -2511.457
#> iteration = 235 log-lik diff = 0.0003089447 log-lik = -2511.457
#> iteration = 236 log-lik diff = 0.0002989046 log-lik = -2511.457
#> iteration = 237 log-lik diff = 0.0002891918 log-lik = -2511.456
#> iteration = 238 log-lik diff = 0.0002797957 log-lik = -2511.456
#> iteration = 239 log-lik diff = 0.0002707058 log-lik = -2511.456
#> iteration = 240 log-lik diff = 0.0002619122 log-lik = -2511.455
#> iteration = 241 log-lik diff = 0.0002534051 log-lik = -2511.455
#> iteration = 242 log-lik diff = 0.0002451751 log-lik = -2511.455
#> iteration = 243 log-lik diff = 0.0002372133 log-lik = -2511.455
#> iteration = 244 log-lik diff = 0.0002295108 log-lik = -2511.454
#> iteration = 245 log-lik diff = 0.0002220591 log-lik = -2511.454
#> iteration = 246 log-lik diff = 0.00021485 log-lik = -2511.454
#> iteration = 247 log-lik diff = 0.0002078756 log-lik = -2511.454
#> iteration = 248 log-lik diff = 0.0002011283 log-lik = -2511.454
#> iteration = 249 log-lik diff = 0.0001946005 log-lik = -2511.453
#> iteration = 250 log-lik diff = 0.0001882852 log-lik = -2511.453
#> iteration = 251 log-lik diff = 0.0001821754 log-lik = -2511.453
#> iteration = 252 log-lik diff = 0.0001762643 log-lik = -2511.453
#> iteration = 253 log-lik diff = 0.0001705455 log-lik = -2511.453
#> iteration = 254 log-lik diff = 0.0001650127 log-lik = -2511.453
#> iteration = 255 log-lik diff = 0.0001596599 log-lik = -2511.452
#> iteration = 256 log-lik diff = 0.0001544811 log-lik = -2511.452
#> iteration = 257 log-lik diff = 0.0001494707 log-lik = -2511.452
#> iteration = 258 log-lik diff = 0.0001446232 log-lik = -2511.452
#> iteration = 259 log-lik diff = 0.0001399332 log-lik = -2511.452
#> iteration = 260 log-lik diff = 0.0001353957 log-lik = -2511.452
#> iteration = 261 log-lik diff = 0.0001310056 log-lik = -2511.452
#> iteration = 262 log-lik diff = 0.0001267582 log-lik = -2511.451
#> iteration = 263 log-lik diff = 0.0001226488 log-lik = -2511.451
#> iteration = 264 log-lik diff = 0.0001186729 log-lik = -2511.451
#> iteration = 265 log-lik diff = 0.0001148262 log-lik = -2511.451
#> iteration = 266 log-lik diff = 0.0001111044 log-lik = -2511.451
#> iteration = 267 log-lik diff = 0.0001075035 log-lik = -2511.451
#> iteration = 268 log-lik diff = 0.0001040195 log-lik = -2511.451
#> iteration = 269 log-lik diff = 0.0001006486 log-lik = -2511.451
#> iteration = 270 log-lik diff = 9.738721e-05 log-lik = -2511.451
#> iteration = 271 log-lik diff = 9.423168e-05 log-lik = -2511.45
#> iteration = 272 log-lik diff = 9.117858e-05 log-lik = -2511.45
#> iteration = 273 log-lik diff = 8.822458e-05 log-lik = -2511.45
#> iteration = 274 log-lik diff = 8.536645e-05 log-lik = -2511.45
#> iteration = 275 log-lik diff = 8.260108e-05 log-lik = -2511.45
#> iteration = 276 log-lik diff = 7.992544e-05 log-lik = -2511.45
#> iteration = 277 log-lik diff = 7.733663e-05 log-lik = -2511.45
#> iteration = 278 log-lik diff = 7.48318e-05 log-lik = -2511.45
#> iteration = 279 log-lik diff = 7.240823e-05 log-lik = -2511.45
#> iteration = 280 log-lik diff = 7.006329e-05 log-lik = -2511.45
#> iteration = 281 log-lik diff = 6.77944e-05 log-lik = -2511.45
#> iteration = 282 log-lik diff = 6.559911e-05 log-lik = -2511.45
#> iteration = 283 log-lik diff = 6.347501e-05 log-lik = -2511.45
#> iteration = 284 log-lik diff = 6.141979e-05 log-lik = -2511.449
#> iteration = 285 log-lik diff = 5.943121e-05 log-lik = -2511.449
#> iteration = 286 log-lik diff = 5.750712e-05 log-lik = -2511.449
#> iteration = 287 log-lik diff = 5.56454e-05 log-lik = -2511.449
#> iteration = 288 log-lik diff = 5.384404e-05 log-lik = -2511.449
#> iteration = 289 log-lik diff = 5.210108e-05 log-lik = -2511.449
#> iteration = 290 log-lik diff = 5.041461e-05 log-lik = -2511.449
#> iteration = 291 log-lik diff = 4.878281e-05 log-lik = -2511.449
#> iteration = 292 log-lik diff = 4.720389e-05 log-lik = -2511.449
#> iteration = 293 log-lik diff = 4.567614e-05 log-lik = -2511.449
#> iteration = 294 log-lik diff = 4.419791e-05 log-lik = -2511.449
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#> number of iterations= 547
plot(out, density = TRUE)
Created on 2024-02-09 with reprex v2.0.2
This is my sessionInfo():
R version 4.3.2 (2023-10-31 ucrt)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19045)
Matrix products: default
locale:
[1] LC_COLLATE=Dutch_Netherlands.utf8 LC_CTYPE=Dutch_Netherlands.utf8 LC_MONETARY=Dutch_Netherlands.utf8
[4] LC_NUMERIC=C LC_TIME=Dutch_Netherlands.utf8
time zone: Europe/Amsterdam
tzcode source: internal
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] CopernicusMarine_0.2.3 mixtools_2.0.0 ggplot2_3.4.4 readr_2.1.4
[5] dplyr_1.1.4
loaded via a namespace (and not attached):
[1] gtable_0.3.4 xfun_0.41 httr2_1.0.0 htmlwidgets_1.6.4 processx_3.8.3
[6] lattice_0.21-9 callr_3.7.3 tzdb_0.4.0 ps_1.7.5 vctrs_0.6.5
[11] tools_4.3.2 generics_0.1.3 curl_5.2.0 parallel_4.3.2 tibble_3.2.1
[16] fansi_1.0.6 highr_0.10 pkgconfig_2.0.3 Matrix_1.6-1.1 data.table_1.14.10
[21] lifecycle_1.0.4 compiler_4.3.2 farver_2.1.1 textshaping_0.3.7 munsell_0.5.0
[26] htmltools_0.5.7 yaml_2.3.8 lazyeval_0.2.2 plotly_4.10.3 pillar_1.9.0
[31] crayon_1.5.2 tidyr_1.3.0 MASS_7.3-60 nlme_3.1-163 tidyselect_1.2.0
[36] digest_0.6.33 kernlab_0.9-32 purrr_1.0.2 labeling_0.4.3 splines_4.3.2
[41] fastmap_1.1.1 grid_4.3.2 colorspace_2.1-0 cli_3.6.2 magrittr_2.0.3
[46] survival_3.5-7 utf8_1.2.4 clipr_0.8.0 withr_2.5.2 scales_1.3.0
[51] rappdirs_0.3.3 segmented_2.0-1 bit64_4.0.5 rmarkdown_2.25 httr_1.4.7
[56] bit_4.0.5 ragg_1.2.7 hms_1.1.3 evaluate_0.23 knitr_1.45
[61] viridisLite_0.4.2 rlang_1.1.2 glue_1.6.2 reprex_2.0.2 pkgload_1.3.3
[66] rstudioapi_0.15.0 vroom_1.6.5 jsonlite_1.8.8 R6_2.5.1 systemfonts_1.0.5
[71] fs_1.6.3
