Andreas Sjödin
Andreas Sjödin
@devonorourke @nextgenusfs Any updates on using amptk with nanopore? I have been playing around a little with my nanopore amplicons (16S, 16S23S, ITS, 18S) but I am not able to...
@PaQwecy @MatthewHiggins2017 I could fix it by downgrading semantic_version to version 2.6.0. I have not yet checked what is causing the issue in newer versions.
I would recommend you to look into conda to handle your python installation. SWGA is added to bioconda so you may install by following instructions here: https://bioconda.github.io/recipes/swga/README.html
I updated swga in Bioconda to the latest commit so it should now be ok to use.
@bioconda-bot recheck
@BiocondaBot please fetch artifacts
@BiocondaBot please update