ERROR-get_tx_seq : No genes were found on chromosomes defined in fasta file.

[yaskermezli]

Hi,

I'm using the get_tx_seq function from gtftk and I'm getting this error

Here the header of my genome_fasta.fa file :

1 dna:chromosome chromosome:GRCm38:1:1:195471971:1 REF NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN

to test that I deleted headers after chr [dna:chromosome chromosome:GRCm38:1:1:195471971:1 REF] but still getting the same error

Any help/suggestion ?

Thank you