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How to impute all genes from SC data for Spatial data

Open wjwei-handsome opened this issue 5 months ago • 1 comments

Thank you for developing scENVI — it’s a great tool!

As the title says, it seems that scENVI only imputes highly variable genes (default: 2048) in the single-cell data, along with the genes already present in the spatial data. I wonder if it’s possible to impute all genes?

Best regards, Wenjie

wjwei-handsome avatar Aug 04 '25 13:08 wjwei-handsome