David L. Dotson

Hi @wehs7661! Hmmm, this is an interesting case; thank you for bringing it up! I agree with @mrshirts that if you can package up a reduced set of this data...

Let me see what I can do. I'll add changes to this PR if I can make this work smoothly with minimal changes.

I don't have a good fix for this beyond: 1. Migrating the ff files into the package structure tree, where they will end up on a normal install. 2. Removing...

I don't think either threading or use of a semaphore would be necessary to get a performance boost out of this. As it stands, performing an analysis on each frame...

@orbeckst I'll give it a shot with the python-based readers as a 0th order test. I'll report back what I get. Since this problem might also scale with number of...

> Or is the idea that iteration returns the chunks themselves and then user code has to deal with them? The idea is to make this transparent by default, but...

Sorry folks for the delay, working against a deadline. Have this on my task list for later this week.

## Review checklist for @dotsdl ### Conflict of interest - [x] I confirm that I have read the [JOSS conflict of interest (COI) policy](https://github.com/openjournals/joss/blob/master/COI.md) and that: I have no COIs...

@ijpulidos can we sync up on this early this week? I'd like to be in a position to run this protocol locally, ideally by 11/08. Is there anything blocking this...

FWIW, seconding all the the points raised in this discussion. I think it's a huge boon if tools written in Python can actually be used directly from a Python session,...