zhang dong

试试例子文件里面的genbank文件是否可以跑，如果可以，那你的序列的注释可能有问题，对照检查一下 ffccff ***@***.***> 于2023年11月9日周四 15:25写道： > Traceback (most recent call last): > File "src\handleGB.py", line 2748, in _exec > File "src\handleGB.py", line 4043, in saveGeneralFile > File "src\handleGB.py", line 1034,...

你可能动了phylosuite的一些设置文件，试试重新下载phylosuite看看能不能正常提取 SYY09 ***@***.***> 于2024年3月19日周二 00:30写道： > Traceback (most recent call last): > File "codes\src\main.py", line 2745, in popFunction > File "codes\src\main.py", line 1073, in on_Extract_triggered > File "codes\src\Lg_extracter.py", line 97,...

Please follow https://dongzhang0725.github.io/documentation/#7-3-MrBayes-does-not-work to try to fix this problem.

Please try the example file first. If it works, there may be some problem with your input file. Starryunivers ***@***.***> 于2024年4月19日周五 10:39写道： > The program encountered an unforeseen problem, please...

You can try to create a new workplace, then try these operations again. Starryunivers ***@***.***> 于2024年4月19日周五 13:48写道： > Just when I click on this Mrbayes option, it will pop up...

你的序列里面有 QQA，这个不是标准的密码子序列，需要先调整一下序列 Jasemineyouzi ***@***.***> 于2022年12月21日周三 22:22写道： > 老师您好！在使用MAFFT时出现了报错，我的是蛋白序列，选择了codon模式 > 问题如下 > Traceback (most recent call last): > File "site-packages\Bio\Seq.py", line 2588, in _translate_str > File "site-packages\Bio\Data\CodonTable.py", line 385, in *getitem*...

for installation, refer to here: http://phylosuite.jushengwu.com/dongzhang0725.github.io/installation/#2-Install-using-pip Wanyu.Zhang ***@***.***> 于2023年8月9日周三 11:10写道： > I installed PhyloSuite by pip install PhyloSuite and launched it by > command PhyloSuite, but the launching has failed...

@cyclinbox Yes, you are right, as recorded in the installation page, if you use python 3.6, `pip install PhyloSuite` will work, and Biopython v1.77 will be selected to install. Dong

Hi, the best way to resolve this is to copy the sequence IDs in NCBI's search box in nucleotide database, then download the sequences and import them to PhyloSuite. see...

your fasta file is not in standard format, there should have a line break between sequence name and sequence.