PhyloSuite
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运行显示错误,无法提取序列?
Traceback (most recent call last): File "src\handleGB.py", line 2748, in _exec File "src\handleGB.py", line 4043, in saveGeneralFile File "src\handleGB.py", line 1034, in align_order TypeError: 'NoneType' object is not iterable 分析质粒,但无法正常提取序列,遇到以上解释?
试试例子文件里面的genbank文件是否可以跑,如果可以,那你的序列的注释可能有问题,对照检查一下
ffccff @.***> 于2023年11月9日周四 15:25写道:
Traceback (most recent call last): File "src\handleGB.py", line 2748, in _exec File "src\handleGB.py", line 4043, in saveGeneralFile File "src\handleGB.py", line 1034, in align_order TypeError: 'NoneType' object is not iterable 分析质粒,但无法正常提取序列,遇到以上解释?
— Reply to this email directly, view it on GitHub https://github.com/dongzhang0725/PhyloSuite/issues/85, or unsubscribe https://github.com/notifications/unsubscribe-auth/ADZXXOIO6EWB5G5UOWVAXO3YDSAQHAVCNFSM6AAAAAA7ECWZESVHI2DSMVQWIX3LMV43ASLTON2WKOZRHE4DIOJZGI2TSNY . You are receiving this because you are subscribed to this thread.Message ID: @.***>
Traceback (most recent call last): File "codes\src\main.py", line 2745, in popFunction File "codes\src\main.py", line 1073, in on_Extract_triggered File "codes\src\Lg_extracter.py", line 97, in init File "codes\src\Lg_extracter.py", line 474, in guiRestore File "codes\src\Lg_extracter.py", line 728, in displaySettings File "codes\src\Lg_extracter.py", line 739, in switchSeqType AttributeError: 'ExtractGB' object has no attribute 'allVersions' 提取线粒体基因组序列,无法提取。请问这是什么原因,感谢!
你可能动了phylosuite的一些设置文件,试试重新下载phylosuite看看能不能正常提取
SYY09 @.***> 于2024年3月19日周二 00:30写道:
Traceback (most recent call last): File "codes\src\main.py", line 2745, in popFunction File "codes\src\main.py", line 1073, in on_Extract_triggered File "codes\src\Lg_extracter.py", line 97, in init File "codes\src\Lg_extracter.py", line 474, in guiRestore File "codes\src\Lg_extracter.py", line 728, in displaySettings File "codes\src\Lg_extracter.py", line 739, in switchSeqType AttributeError: 'ExtractGB' object has no attribute 'allVersions' 提取线粒体基因组序列,无法提取。请问这是什么原因,感谢!
— Reply to this email directly, view it on GitHub https://github.com/dongzhang0725/PhyloSuite/issues/85#issuecomment-2004389507, or unsubscribe https://github.com/notifications/unsubscribe-auth/ADZXXOLOXM5GU3JJ72F6MPTYY4JB3AVCNFSM6AAAAAA7ECWZESVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDAMBUGM4DSNJQG4 . You are receiving this because you commented.Message ID: @.***>