运行MAFFT遇到encountered an unforeseen problem

[suanhaijiao]

老师您好！ 我在运行MAFFT的时候遇到如下报错 During handling of the above exception, another exception occurred:

Traceback (most recent call last): File "codes\src\Lg_mafft.py", line 394, in run_command File "codes\src\Lg_mafft.py", line 470, in align File "codes\src\Lg_mafft.py", line 52, in init File "codes\src\Lg_mafft.py", line 107, in translate File "site-packages\Bio\Seq.py", line 2605, in _translate_str Bio.Data.CodonTable.TranslationError: Codon 'TA.' is invalid

感谢您的帮助！

[dongzhang0725]

你好像是用的密码子比对模式，报错是说你的序列不是密码子序列，可能不是3的倍数，你先检查好开放阅读框再比对。

suanhaijiao @.***> 于2022年2月24日周四 19:27写道：

老师您好！ 我在运行MAFFT的时候遇到如下报错 During handling of the above exception, another exception occurred:

Traceback (most recent call last): File "codes\src\Lg_mafft.py", line 394, in run_command File "codes\src\Lg_mafft.py", line 470, in align File "codes\src\Lg_mafft.py", line 52, in init File "codes\src\Lg_mafft.py", line 107, in translate File "site-packages\Bio\Seq.py", line 2605, in _translate_str Bio.Data.CodonTable.TranslationError: Codon 'TA.' is invalid

感谢您的帮助！

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[suanhaijiao]

非常感谢！！！