dongZheX
dongZheX
Hi, I use the strategy in《How Powerful are Graph Neural Networks?》 that adopt by many other papers at present. But I don't think this strategy is correct, the method in...
> 麻烦你首先看一下你启动fitlog的命令行有报什么错吗？401条应该还是可以加载的 你好，谢谢回复。 命令行并没有报任何错误，既然它可以加载401条数据，那应该是别的地方出现错误，我再排除一下。
> 那你在打开chrome的开发者模式（一般情况下是摁F12），看看它console输出的报错是啥。  Console里只有这么一个返回，应该是table中一个错误的返回。
你好我已经找到了错误，在一个实验记录中，loss出现了NaN值，所以导致了这个错误。
Hi, without any changing, I change the CUDA_VISIBLE_DEVICES to 0,1,2,3 With seed 1 (use pcqm4mv1_graphormer_base), the result is: {'epoch-best': {'val': {'auc': 0.8268111745401395}, 'test': {'auc': 0.8071068343864125}}} With seed 2, the result...
with scripts: ``` n_gpu=2 epoch=8 max_epoch=$((epoch + 1)) batch_size=64 tot_updates=$((33000*epoch/batch_size/n_gpu)) warmup_updates=$((tot_updates * 6 / 100)) CUDA_VISIBLE_DEVICES=6,7 fairseq-train \ --user-dir graphormer \ --num-workers 16 \ --ddp-backend=legacy_ddp \ --dataset-name ogbg-molhiv \ --dataset-source...
My log is in the attached file. The "hiv_base_warmup006" represents that we set the warmup_updates=$((tot_updates * 6 / 100)) . The "hiv_base_v4" represents that we set the n_gpu=4 and use...
> @dongZheX Thanks. It seems that the attached files cannot be downloaded. Could you please double check? I put the files in my repository: https://github.com/dongZheX/myexp
> @dongZheX Thanks for reporting the issue. After checking, we found that we used the wrong checkpoint for finetuning MolHIV. #96 is opened to fix this. And following lists the...
> @dongZheX Thanks for reporting the issue. After checking, we found that we used the wrong checkpoint for finetuning MolHIV. #96 is opened to fix this. And following lists the...