dockerhub-toolshed

Add container sputnik:1.0.

1

**Hash**: sputnik:1.0 **Packages**: - sputnik=1.0 Base Image:bgruening/busybox-bash:0.1 **For** : - microsats_alignment_level.xml Generated with Planemo.

**Hash**: mulled-v2-3ad66349506032f94f658345a79efcbb5699a9d6:519c6f9e0f9f5fadfdf4067b1101cb33c6e28116 **Packages**: - pysam=0.7.6 - htseq=0.5.4p3 - matplotlib=1.2.1 Base Image:bgruening/busybox-bash:0.1 **For** : - htseqsams2mx.xml Generated with Planemo.

**Hash**: mulled-v2-d84c7ac75ce642b5fb56734645d3112bbcbc03d5:6da9a035eee3bb8667414c2aaab3a3d700b28b2e **Packages**: - r-gridextra=2.3=r36h6115d3f_1002 - icu=64.2=he1b5a44_1 - samtools=1.9=h10a08f8_12 - sambamba=0.6.6 - numpy=1.11.2=py27_0 - r-reshape2=1.4.3=r36h29659fb_0 - r-latticeextra=0.6_28=r36h6115d3f_1002 - r-optparse=1.6.4=r36h6115d3f_0 - pysam=0.15.3=py27hda2845c_1 Base Image:bgruening/busybox-bash:0.1 **For** : - small_rna_maps.xml Generated with Planemo.

**Hash**: lastz:1.02.00 **Packages**: - lastz=1.02.00 Base Image:bgruening/busybox-bash:0.1 **For** : - lastz_paired_reads_wrapper.xml Generated with Planemo.

**Hash**: mulled-v2-aa1d7bddaee5eb6c4cbab18f8a072e3ea7ec3969:9bd97ac60f664f6f72157d3cb53525a19eb75477 **Packages**: - gatk=1.4 - samtools=0.1.18 Base Image:bgruening/busybox-bash:0.1 **For** : - indel_realigner.xml - unified_genotyper.xml - depth_of_coverage.xml - variant_annotator.xml - realigner_target_creator.xml - count_covariates.xml - table_recalibration.xml - print_reads.xml Generated with Planemo.

**Hash**: taxonomy:1.0.0 **Packages**: - taxonomy=1.0.0 Base Image:bgruening/busybox-bash:0.1 **For** : - poisson2test.xml - lca.xml - gi2taxonomy.xml - find_diag_hits.xml - t2ps_wrapper.xml - t2t_report.xml Generated with Planemo.

**Hash**: mulled-v2-a2c8e2a21aeee25b8b11010c0e796518dd79e2f7:2c7dd264644d2b10f539e0f9d7aa7c05771f48b9 **Packages**: - tophat=1.4.0 - bowtie=0.12.7 - samtools=0.1.18 Base Image:bgruening/busybox-bash:0.1 **For** : - tophat_wrapper.xml Generated with Planemo.

**Hash**: mulled-v2-8448e564f661806bf1f0d06f059b5f477b7c0b1d:d115198af6b03e10ea527dacfcc9b03d400783b5 **Packages**: - r-optparse=1.6.1=r351h6115d3f_0 - pysam=0.11.2.1=py27_0 - numpy=1.11.2=py27_0 - r-latticeextra=0.6_28=r351h6115d3f_0 - r-gridextra=2.3=r351h6115d3f_0 Base Image:bgruening/busybox-bash:0.1 **For** : - signature.xml Generated with Planemo.

**Hash**: mulled-v2-dc422f74572321627996aa5f1ae09bb26455f9de:dc2c444e227487bb0b116ffa50e36fd42b5a3c8d **Packages**: - freebayes=freebayes-0.9.14_8a407cf5f4 - samtools=0.1.18 Base Image:bgruening/busybox-bash:0.1 **For** : - bamleftalign.xml Generated with Planemo.

**Hash**: cd-hit-auxtools:0.5-2012-03-07-fix-dan-gh-0.0.1 **Packages**: - cd-hit-auxtools=0.5-2012-03-07-fix-dan-gh-0.0.1 Base Image:bgruening/busybox-bash:0.1 **For** : - cd_hit_dup.xml Generated with Planemo.