Issue compiling T.function on theano

[nathaliehb]

Hi, I am not a computer scientist and I am pretty new to Ipython and mac (please avoid the computer jargon, that would be helpful). I am trying to use theano on python 3 via Ipython. I have imported successfully theano but when I am calling T.funtion or T.grad...., I got a tremendous pink error message endind by the following below: I have no clue, what that means. Can someone please help.Thanks a lot

Config:mac os x 10.10 - python 3

Exception Traceback (most recent call last) in () ----> 1 f = theano.function([x],y)

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/compile/function.py in function(inputs, outputs, mode, updates, givens, no_default_updates, accept_inplace, name, rebuild_strict, allow_input_downcast, profile, on_unused_input) 318 # borrowed used defined inputs 319 fn._check_for_aliased_inputs = check_for_aliased_inputs --> 320 return fn

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/compile/pfunc.py in pfunc(params, outputs, mode, updates, givens, no_default_updates, accept_inplace, name, rebuild_strict, allow_input_downcast, profile, on_unused_input, output_keys) 477 except AttributeError: 478 givens_pairs = givens --> 479 for x, y in givens_pairs: 480 if x in in_var_set: 481 raise RuntimeError(

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/compile/function_module.py in orig_function(inputs, outputs, mode, accept_inplace, name, profile, on_unused_input, output_keys)

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/compile/function_module.py in create(self, input_storage, trustme, storage_map) 1639 " and thus they cannot be assigned through keyword " 1640 "arguments (use 'name=...' in a Variable's " -> 1641 "constructor to give it a name)." % n_unnamed_inputs) 1642 else: 1643 if n_unnamed_inputs == 0:

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/gof/link.py in make_thunk(self, input_storage, output_storage, storage_map) 688 """ 689 fgraph = self.fgraph --> 690 order = self.schedule(fgraph) 691 no_recycling = self.no_recycling 692

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/gof/vm.py in make_all(self, profiler, input_storage, output_storage, storage_map) 1001 compute_map[k] = [k.owner is None] 1002 -> 1003 thunks = [] 1004 1005 # Collect Reallocation Info

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/gof/op.py in make_thunk(self, node, storage_map, compute_map, no_recycling) 968 self.dict.update(d) 969 # If we unpickle old op --> 970 if not hasattr(self, "openmp"): 971 self.openmp = False 972

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/gof/op.py in make_c_thunk(self, node, storage_map, compute_map, no_recycling) 877 else: 878 assert action == 'warn' --> 879 warnings.warn(msg, stacklevel=2) 880 881

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/gof/cc.py in make_thunk(self, input_storage, output_storage, storage_map, keep_lock) 1198 sig.append('NPY_ABI_VERSION=0x%X' % 1199 numpy.core.multiarray._get_ndarray_c_version()) -> 1200 if c_compiler: 1201 sig.append('c_compiler_str=' + c_compiler.version_str()) 1202

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/gof/cc.py in compile(self, input_storage, output_storage, storage_map, keep_lock) 1141 booleans, indicating whether each output is in the 1142 no_recycling set. Older versions of compiled modules only have the -> 1143 no_recycle list. 1144 """ 1145 return self.cmodule_key_(self.fgraph, self.no_recycling,

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/gof/cc.py in cthunk_factory(self, error_storage, in_storage, out_storage, storage_map, keep_lock) 1593 return self 1594 -> 1595 def make_all(self, profiler=None, input_storage=None, output_storage=None): 1596 1597 # The lock will be acquired when we compile the first

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/gof/cmodule.py in module_from_key(self, key, lnk, keep_lock) 1140 # same time. This can happen as we read the cache 1141 # without taking the lock. -> 1142 if i == 2: 1143 with compilelock.lock_ctx(): 1144 with open(key_pkl, 'rb') as f:

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/gof/cc.py in compile_cmodule(self, location) 1504 1505 def find_task(self, failure_code): -> 1506 """ 1507 Maps a failure code to the task that is associated to it. 1508 """

/Users/xxx/anaconda/lib/python3.5/site-packages/theano/gof/cmodule.py in compile_str(module_name, src_code, location, include_dirs, lib_dirs, libs, preargs, py_module, hide_symbols)

Exception: ('The following error happened while compiling the node', InplaceDimShuffle{}(TensorConstant{1}), '\n', "Compilation failed (return status=1): In file included from /Users/xxx/.theano/compiledir_Darwin-14.1.0-x86_64-i386-64bit-i386-3.5.1-64/tmpgph_c4e6/mod.cpp:2:. In file included from /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/iostream:38:. In file included from /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/ios:216:. In file included from /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/__locale:15:. In file included from /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/string:439:. In file included from /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/algorithm:628:. In file included from /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/memory:604:. /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/iterator:341:10: fatal error: '__debug' file not found. #include <__debug>. ^. 1 error generated.. ", '[InplaceDimShuffle{}(TensorConstant{1})]')

[dnouri]

You may have experienced this error because the Theano version wasn't compatible with your version of CUDA. I've updated the requirements. Can you run this again and see if this fixes your issue:

pip install -r https://raw.githubusercontent.com/dnouri/kfkd-tutorial/master/requirements.txt