biobert
biobert copied to clipboard
Help required with NER
I want to use this Model for NER and for my dataset. Being too much new to this I can't find my way to get my data tagged with it. What I wanna do is to give a input and get all the medical terms tagged out. If anyone can help me I will be thankful.
Hey @Orneyfish. Please refine your questions because it is difficult to understand. What is the format of your data? What kind of tags do you expect?
My tags are Diseases, drugs mostly like that. I want to give a input of some sentences and get it tagged by the model. Do I need to have those sentences embedded? If so what's the next step. Can you guide me? Thanks and Regards, Anurag
On Tue, Sep 1, 2020 at 2:05 PM AndreasSaka [email protected] wrote:
Hey @Orneyfish https://github.com/Orneyfish. Please refine your questions because it is difficult to understand. What is the format of your data? What kind of tags do you expect?
— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/dmis-lab/biobert/issues/136#issuecomment-684575726, or unsubscribe https://github.com/notifications/unsubscribe-auth/AM5QXABQGAQRFL3542KCJS3SDSW3LANCNFSM4QQFNNQQ .
Hi @Orneyfish were you able to figure out how to go about doing it? I have some pubmed text files where I want the model to tag the diseases. Could you please help me with it?