Kumar

How to calculate Heaps Alpha value from the roary pangenome analysis ?

3

I have performed the bacterial pangenome analysis using your pipeline. But, I do not know how to obtain/calculate the Heaps Alpha value from the analysis result, to know the pangenome...

String Extraction from Excel Sheet

2

I need to extract a particular string from an xls or csv file along with the string containing entire row and may be stored in another excel file, so that...

How to annotate with custom database alone?

1

I need to annotate TAL effectors which is highly repetitive in nature. Therefore, I would like to create TAL effector database with the available TALE protein sequences. Therefore, I would...

Can't perform group label style 5

1

I would like to generate a circular tree with group labels similar to `group label style 5`, I could successfully draw group label style 4, but I could not understand...

Uncaught exception from user code: Error running buildSNPDB.pl

1

I have successfully installed Phame on my Desktop computer through conda (Ubuntu 16.04 64 bit OS; 8 GB RAM, Core i7 processor). I had ran the test files successfully, however...

Error: Please add the DBSCAN-SWA installation directory to your $PATH environment variable before running the executable from another folder

3

I have followed all the instruction mentioned in your `readme` installed all the necessary dependencies and added the DBSCAN_SWA in my `.bashrc ` and also added in terminal also using...