Kumar

Thank you @neelam19051 for your response on my request. I have managed to learn how to calculate the alpha value from the roary pipeline out-put using micropan R package.

@maziz2, @meren As you mentioned I have downloaded the file (shows error all the time) by using the following command `rsync --copy-links --times --verbose rsync://ftp.ncbi.nlm.nih.gov/pub/COG/COG2020/data/cog-20.fa.gz /home/ga214/miniconda3/envs/anvio-7/lib/python3.6/site-packages/anvio/data/misc/COG/COG20/RAW_DATA_FROM_NCBI` But, I do not...

@maziz2 Thank you for your time and help. I followed your instruction but end-up with the following error, ``` (anvio-7) ga214@ga:~$ anvi-setup-ncbi-cogs --cog-version COG20 -T 14 --debug COG version ..................................:...

@cjain, yeah grep worked for one string search, while I search multiple search it shows error. The command I used given below grep "AvrBs" citri.xls > test.csv But, I need...

Thank you @HIT-ImmunologyLab . PATH variable issue has resolved now. But, now I am getting another error as follows, ``` ga@ga214:~$ python3 ~/Documents/tools/prophage_DBSCAN-SWA/bin/dbscan-swa.py --input ~/Documents/tools/prophage_DBSCAN-SWA/test/NC_007054.gb --output dinesh --prefix din Warning:The...