recovery our custom discovery have a problem

[Eve12126]

Hi,

When using bulk data to run "recovery", we select "Carcinoma", no error will be reported. But when we use the same bulk data to run "recovery" our custom discovery, there is such an error: "Error in [<-.data.frame(*tmp*, , col, value = 1L) : replacement has 1 row, data has 0 Calls: "

Best.

[BALuca]

Hi,

Would it be possible to send the data you tried, the command line and the R version you used to [email protected], so that we can investigate the issue?

Best, The EcoTyper team

[Eve12126]

Thank you, we have solved the above problem. But we now have a new problem.When I reached the second step-’Step 2 (cell state discovery on correrlation matrices): Aggregating NMF results...‘, it reported the following error-’Error in consensus + nrun(x) * consensus(x) : non-conformable arrays Execution halted‘, Can you help me answer what is causing this?Thank you for answering！

[BALuca]

Hi, I suspect that it is a formatting issue with the input data or an issue in the configuration files. Would it be possible to send us the config file and the top 10 rows of your input file at [email protected]? Best, The EcoTyper team