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Error on load

Open bdeonovic opened this issue 10 years ago • 2 comments

julia> using BioSeq
ERROR: LoadError: LoadError: syntax: function static parameter names not unique
 in include at ./boot.jl:254
 in include_from_node1 at ./loading.jl:264
 in include at ./boot.jl:254
 in include_from_node1 at ./loading.jl:264
 in require at ./loading.jl:203
while loading /Users/bdeonovic/.julia/v0.4/BioSeq/src/alphabetsfunc.jl, in expression starting on line 11
while loading /Users/bdeonovic/.julia/v0.4/BioSeq/src/BioSeq.jl, in expression starting on line 78

bdeonovic avatar Aug 18 '15 13:08 bdeonovic

Hi @bdeonovic, I believe it's a compatibility issue with Julia 0.4. I still don't migrate the code into that Julia version. It works fine on Julia 0.3.10. What do you need? Maybe (the Seq module) of Bio.jl can be useful for you. Bio.jl takes a lot of the sequence stuffs of this package. If you are working with protein MSAs, you can try my work in progress: (the MSA module of) MIToS. Both packages are developed on Julia 0.4. Best

diegozea avatar Aug 18 '15 14:08 diegozea

Thanks! I was not aware of Bio.jl, I thought that BioSeq.jl was the official Bioinformatics package for Julia. Bio.jl looks great and has lots of the features already that I am interested in.

bdeonovic avatar Aug 18 '15 19:08 bdeonovic