BioSeq.jl
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Error on load
julia> using BioSeq
ERROR: LoadError: LoadError: syntax: function static parameter names not unique
in include at ./boot.jl:254
in include_from_node1 at ./loading.jl:264
in include at ./boot.jl:254
in include_from_node1 at ./loading.jl:264
in require at ./loading.jl:203
while loading /Users/bdeonovic/.julia/v0.4/BioSeq/src/alphabetsfunc.jl, in expression starting on line 11
while loading /Users/bdeonovic/.julia/v0.4/BioSeq/src/BioSeq.jl, in expression starting on line 78
Hi @bdeonovic, I believe it's a compatibility issue with Julia 0.4. I still don't migrate the code into that Julia version. It works fine on Julia 0.3.10. What do you need? Maybe (the Seq module) of Bio.jl can be useful for you. Bio.jl takes a lot of the sequence stuffs of this package. If you are working with protein MSAs, you can try my work in progress: (the MSA module of) MIToS. Both packages are developed on Julia 0.4. Best
Thanks! I was not aware of Bio.jl, I thought that BioSeq.jl was the official Bioinformatics package for Julia. Bio.jl looks great and has lots of the features already that I am interested in.