How to generate annotations_enhanced.csv? and how do you plot Figure 3: Feature importance plot. in pdf thanks

[guyucowboy]

Hi, dhammack. Your work is great ! Thank you for sharing! I have two questions to ask you.

1. how to generate annotations_enhanced.csv? which code can generate this file?
2. how do you know the Feature importance mentioned in pdf file? How to calculate that? Could you provide and share the relevant code? Looking forward to a reply.Thank you very much!

[dhammack]

annotations_enhanced.csv is in training_code/Dlung. Feature importance is calculated using scikit learn ExtraTreesRegressor.

[ilariabonavita]

Hi Daniel! Thanks for the great job and code... I have the same question as guyucowboy. I find the annotations_enhanced.csv but I cannot find HOW this has been generated. I am really struggling with finding a mapping between the LIDC nodules and the LUNA16 ones, I've been looking everywhere without much success.... knowing how you generated that file would immensely help me:) Thanks!

[dhammack]

Phew that mapping was a mess. I have an ipy notebook somewhere that does it. Let me see if i can find it and upload

[dhammack]

Added it to root dir. Hopefully it has what you are looking for.

[ilariabonavita]

Hey Daniel, thanks a lot, that's what I was looking for!