Dan Fornika

Hi, I'm just sitting down to start day two of the Mozilla Global Sprint so I thought I'd check in. Yesterday I got slowed down a bit getting my galaxy...

Well I'm still making slow progress on this, but I did uncover a bug in galaxy: https://github.com/galaxyproject/galaxy/issues/6127 I got some more help from the galaxy gitter.im channel and they tracked...

@trvinh Hi! I haven't had much time to look at this since the Mozilla Sprint. I don't think I'll have much time to get back to it for at least...

Bracken needs to know the (approximate) size of the reads. I don't understand the technical reason for it, but the Bracken db/index is built for a specific read length. If...

This class exists to generate a `tools-list.yml` file from an `irida_workflow.xml`: https://github.com/phac-nml/irida/blob/development/src/main/java/ca/corefacility/bioinformatics/irida/util/ToolsListExporter.java Maybe the functionality could be added to: https://github.com/phac-nml/irida/blob/development/src/main/java/ca/corefacility/bioinformatics/irida/service/workflow/IridaWorkflowLoaderService.java (?)

I hope this is helpful, I'm still a bit confused about what is going on with all of this dependency resolution. But at this point, if I try to create...

Thanks for doing those tests @apetkau, I hadn't found a way to get a successful dependency resolution and installation. Based on what I'm seeing, I do think targeting an earlier...