autocmake
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Published
20 hours ago •
dev-cafe
dev-cafe
tests failed...
Hi Rado,
any help why tests are crashing ?
[email protected]:~/work/software/theoretical_chemistry/autocmake/.py.test -vv test/test.py
============================================================= test session starts =============================================================
platform linux -- Python 3.7.3, pytest-7.1.1, pluggy-1.0.0 -- /usr/bin/python3
cachedir: .pytest_cache
rootdir: /home/milias/work/software/theoretical_chemistry/autocmake
collected 14 items
test/test.py::test_extra_cmake_options FAILED [ 7%]
test/test.py::test_cxx FAILED [ 14%]
test/test.py::test_fc FAILED [ 21%]
test/test.py::test_fc_git_info FAILED [ 28%]
test/test.py::test_fc_int64 FAILED [ 35%]
test/test.py::test_fc_omp FAILED [ 42%]
test/test.py::test_fc_blas FAILED [ 50%]
test/test.py::test_fc_lapack FAILED [ 57%]
test/test.py::test_cxx_cblas FAILED [ 64%]
test/test.py::test_cxx_accelerate FAILED [ 71%]
test/test.py::test_python_interpreter FAILED [ 78%]
test/test.py::test_python_interpreter_custom FAILED [ 85%]
test/test.py::test_python_libs FAILED [ 92%]
test/test.py::test_python_libs_custom FAILED [100%]
================================================================== FAILURES ===================================================================
__________________________________________________________ test_extra_cmake_options ___________________________________________________________
def test_extra_cmake_options():
configure_build_and_exe(
'extra_cmake_options',
> 'python setup --cxx=g++ --cmake-options="-DENABLE_SOMETHING=OFF -DENABLE_FOO=ON"'
)
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:89:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'extra_cmake_options'
setup_command = 'python setup --cxx=g++ --cmake-options="-DENABLE_SOMETHING=OFF -DENABLE_FOO=ON" build-2022-03-22-20-38-02', launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
__________________________________________________________________ test_cxx ___________________________________________________________________
def test_cxx():
> configure_build_and_exe('cxx', 'python setup --cxx=g++')
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:94:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'cxx', setup_command = 'python setup --cxx=g++ build-2022-03-22-20-38-02', launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
___________________________________________________________________ test_fc ___________________________________________________________________
def test_fc():
> configure_build_and_exe('fc', 'python setup --fc=gfortran')
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:98:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'fc', setup_command = 'python setup --fc=gfortran build-2022-03-22-20-38-02', launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
______________________________________________________________ test_fc_git_info _______________________________________________________________
def test_fc_git_info():
> configure_build_and_exe('fc_git_info', 'python setup --fc=gfortran')
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:102:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'fc_git_info', setup_command = 'python setup --fc=gfortran build-2022-03-22-20-38-02', launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
________________________________________________________________ test_fc_int64 ________________________________________________________________
def test_fc_int64():
> configure_build_and_exe('fc_int64', 'python setup --fc=gfortran --int64')
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:106:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'fc_int64', setup_command = 'python setup --fc=gfortran --int64 build-2022-03-22-20-38-02', launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
_________________________________________________________________ test_fc_omp _________________________________________________________________
@skip_on_osx
def test_fc_omp():
os.environ['OMP_NUM_THREADS'] = '2'
> configure_build_and_exe('fc_omp', 'python setup --omp --fc=gfortran')
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:112:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'fc_omp', setup_command = 'python setup --omp --fc=gfortran build-2022-03-22-20-38-02', launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
________________________________________________________________ test_fc_blas _________________________________________________________________
def test_fc_blas():
> configure_build_and_exe('fc_blas', 'python setup --fc=gfortran --blas')
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:116:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'fc_blas', setup_command = 'python setup --fc=gfortran --blas build-2022-03-22-20-38-02', launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
_______________________________________________________________ test_fc_lapack ________________________________________________________________
def test_fc_lapack():
> configure_build_and_exe('fc_lapack', 'python setup --fc=gfortran --lapack')
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:120:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'fc_lapack', setup_command = 'python setup --fc=gfortran --lapack build-2022-03-22-20-38-03', launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
_______________________________________________________________ test_cxx_cblas ________________________________________________________________
@skip_on_osx
def test_cxx_cblas():
> configure_build_and_exe('cxx_cblas', 'python setup --cxx=g++ --cblas')
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:125:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'cxx_cblas', setup_command = 'python setup --cxx=g++ --cblas build-2022-03-22-20-38-03', launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
_____________________________________________________________ test_cxx_accelerate _____________________________________________________________
@skip_on_linux
def test_cxx_accelerate():
configure_build_and_exe('cxx_accelerate',
> 'python setup --cxx=g++ --accelerate')
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:131:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'cxx_accelerate', setup_command = 'python setup --cxx=g++ --accelerate build-2022-03-22-20-38-03', launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
___________________________________________________________ test_python_interpreter ___________________________________________________________
def test_python_interpreter():
> configure_build_and_exe('python_interpreter', 'python setup --cxx=g++')
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:135:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'python_interpreter', setup_command = 'python setup --cxx=g++ build-2022-03-22-20-38-03', launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
_______________________________________________________ test_python_interpreter_custom ________________________________________________________
def test_python_interpreter_custom():
setup = 'python setup --cxx=g++ --python=%s' % sys.executable
> configure_build_and_exe('python_interpreter_custom', setup)
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:140:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'python_interpreter_custom', setup_command = 'python setup --cxx=g++ --python=/usr/bin/python3 build-2022-03-22-20-38-03'
launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
______________________________________________________________ test_python_libs _______________________________________________________________
def test_python_libs():
> configure_build_and_exe('python_libs', 'python setup --cxx=g++')
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:144:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'python_libs', setup_command = 'python setup --cxx=g++ build-2022-03-22-20-38-03', launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
___________________________________________________________ test_python_libs_custom ___________________________________________________________
def test_python_libs_custom():
python_executable = sys.executable
configure_build_and_exe(
'python_libs_custom',
> 'python setup --cxx=g++ --python={0}'.format(python_executable))
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:151:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'python_libs_custom', setup_command = 'python setup --cxx=g++ --python=/usr/bin/python3 build-2022-03-22-20-38-03', launcher = None
def configure_build_and_exe(name, setup_command, launcher=None):
stamp = datetime.datetime.fromtimestamp(
time.time()).strftime('%Y-%m-%d-%H-%M-%S')
os.chdir(os.path.join(HERE, name, 'cmake'))
shutil.copy(os.path.join('..', '..', '..', 'update.py'), 'update.py')
if os.path.exists('autocmake'):
shutil.rmtree('autocmake')
shutil.copytree(os.path.join('..', '..', '..', 'autocmake'), 'autocmake')
stdout, stderr = exe('python update.py ..')
os.chdir(os.path.join(HERE, name))
make_command = 'make'
binary = './bin/example'
if sys.platform == 'win32':
setup_command += ' --generator="MinGW Makefiles"'
make_command = 'mingw32-make'
binary = 'bin\\\example.exe'
if launcher:
binary = '%s %s' % (launcher, binary)
setup_command += ' build-%s' % stamp
stdout, stderr = exe(setup_command)
> assert stderr == ''
E assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
E + python: can't open file 'setup': [Errno 2] No such file or directory
/home/milias/work/software/theoretical_chemistry/autocmake/test/test.py:73: AssertionError
------------------------------------------------------------ Captured stderr call -------------------------------------------------------------
ERROR: you need to install the pyyaml package
python: can't open file 'setup': [Errno 2] No such file or directory
=========================================================== short test summary info ===========================================================
FAILED test/test.py::test_extra_cmake_options - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
FAILED test/test.py::test_cxx - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
FAILED test/test.py::test_fc - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
FAILED test/test.py::test_fc_git_info - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
FAILED test/test.py::test_fc_int64 - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
FAILED test/test.py::test_fc_omp - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
FAILED test/test.py::test_fc_blas - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
FAILED test/test.py::test_fc_lapack - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
FAILED test/test.py::test_cxx_cblas - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
FAILED test/test.py::test_cxx_accelerate - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
FAILED test/test.py::test_python_interpreter - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
FAILED test/test.py::test_python_interpreter_custom - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
FAILED test/test.py::test_python_libs - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
FAILED test/test.py::test_python_libs_custom - assert "python: can't open file 'setup': [Errno 2] No such file or directory\n" == ''
============================================================= 14 failed in 0.69s ==============================================================
[email protected]:~/work/software/theoretical_chemistry/
I have this package installed:
[email protected]:~/work/software/theoretical_chemistry/autocmake/.pip3 install pyyaml
Requirement already satisfied: pyyaml in /usr/lib/python3/dist-packages (3.13)