suitable for metagenomic assemblies?

[guille0387]

Dear deprekate

Thank you so much for developing this, I'm sure it'll come extremely useful for anyone interested in phages :)

Just wanted to ask you if PHANOTATE is suitable for gene calling in phage contigs retrieved from metagenomic assemblies?

Thanks!

[deprekate]

It should be suitable, and one of the better options. Most current gene callers are made to run on bacteria; so much longer sequences (> 20,000bp).